Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00403 ATGGGGCAGTGCTACGGCAAGACTAATCCCTCGCCGGAAACTGACGCCGCCGCGATTCCCAGCTCCGACGACCTTCCTCCGCCGTCAGTCACGCCCTCGGTGAAGAACACTCCGGCGAGAGCTTTATTGTCGCCGTGGCGGAGCCCTTACCCTCACGGAGGTGGCGTGACACCGTCTCCGGCTAGGACAGCGACGCCGAGGAGGATTTTCCGGCGGCCTTTTCCACCTCCGTCTCCCGCGAAGCATATTCGTGCGTCGTTGGCGAAGCGACTGGGGCGAGGCGCGGTGGCGGCGAGGGCAAAGGAGGGGACTATACCGGAGGAGGGAGTGGCGGCGGCGGAGGAAGAGGAGGAGGTGCTGGATAAGAGGTTTGGATATGGAAAGAATTTTGGTGCAAAGTATGAGATTGGGAAGGAAATTGGGAAAGGGCATTTTGGTCATACTTGTTATGCAAGGTGTAAGAAAGGTGAATTCAAGGACCAAGCTGTAGCAGTTAAAATCATTTCCAAGTCTAAGATGACGACAGCGATAGCAATAGAAGATGTTCGGAGAGAGGTGAAGATCTTAAAAGCTCTATCTGGCCATAAGCATCTGATCAAATTTCATGATGCTTTTGAGGATGCCAACAATGTGTACATAGTAATGGAGTATGTTGTTTATCTTATTTTAATTATTATCTGTAGTAAGGGAGGAAAGTATCCGGAGGAGGATGCCAAAGCTATAGTTTTGCAGATTCTAAGCGTAGTTGCTTTTTGTCATCTTCAGGGCGTCGTGCACCGTGACCTAAAACCGGAGAATTTCCTCTTTACTTCAAAAAGTGAAGATGCTGATATGAAGCTTATTGATTTCGGTTTATCGGATTTCATCCGGACAGACGAACGACTAAATGACATTGTTGGGAGTGCATATTATGTTGCACCAGAGGTACTTCACAGGTCATATAGTGTGGAAGCAGATATATGGAGTATCGGTGTGATTACATATATCTTGTTATGTGGAAGTCGACCATTCTGGGCACGAACAGAATCTGGAATTTTCCGTTCAGTGCTCAGAGCTGATCCTAACTTCGAAGATTTACCTTGGCCTTCTGTGTCTGCGGAGGCCAAGGACTTTGTAAAGAGGCTCCTAAACAAGGACTACAGGAAAAGAATGACGGCCGTCCAAGCTCTAACTCACCCTTGGTTGAGGGATGAAAACCGCGTCATCCCTCTCGATATATTAGTTTATAAACTAGTGAAGTCCTATATACATGCAACACCATTCAGACGAGCAGCATTAAAGGCTCTTTCAAAGGCTTTGACAGAAGACGAATTTCCCTATCTTAGAGCGCAATTCAAATTGTTGGAACCAAATCGAGACGGCCACGTATTACTCGACAATTTCAAAATGGCCCTTATACGCCATGCAACCGATGCCATGAGGGAGTCAAAGGTTCTTGATATTATACACGCGATGGAACCACTTGCATACAGAAAGATGGACTTTGAAGAATTCTGTGCAGCTGCAGTTAGCATATATCAATTGGAATCACTTGAAAAGTGGGAAGATATTGCTTCAAATGCTTTTGAGCACTTTGAGAGAGAGGGTAACCGTGTAATTTCAGTTGAAGAATTAGCAAGAGTCCTTGAAATTTGA 1635 0.4642 MGQCYGKTNPSPETDAAAIPSSDDLPPPSVTPSVKNTPARALLSPWRSPYPHGGGVTPSPARTATPRRIFRRPFPPPSPAKHIRASLAKRLGRGAVAARAKEGTIPEEGVAAAEEEEEVLDKRFGYGKNFGAKYEIGKEIGKGHFGHTCYARCKKGEFKDQAVAVKIISKSKMTTAIAIEDVRREVKILKALSGHKHLIKFHDAFEDANNVYIVMEYVVYLILIIICSKGGKYPEEDAKAIVLQILSVVAFCHLQGVVHRDLKPENFLFTSKSEDADMKLIDFGLSDFIRTDERLNDIVGSAYYVAPEVLHRSYSVEADIWSIGVITYILLCGSRPFWARTESGIFRSVLRADPNFEDLPWPSVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDENRVIPLDILVYKLVKSYIHATPFRRAALKALSKALTEDEFPYLRAQFKLLEPNRDGHVLLDNFKMALIRHATDAMRESKVLDIIHAMEPLAYRKMDFEEFCAAAVSIYQLESLEKWEDIASNAFEHFEREGNRVISVEELARVLEI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00403 544 CDD STKc_CAMK 133 394 - -
Adu02g00403 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Adu02g00403 544 PANTHER SERINE/THREONINE-PROTEIN KINASE 44 544 - -
Adu02g00403 544 ProSitePatterns Protein kinases ATP-binding region signature. 140 166 IPR017441 GO:0005524
Adu02g00403 544 SUPERFAMILY Protein kinase-like (PK-like) 125 418 IPR011009 -
Adu02g00403 544 SMART serkin_6 134 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00403 544 Gene3D Phosphorylase Kinase; domain 1 130 219 - -
Adu02g00403 544 ProSiteProfiles Protein kinase domain profile. 134 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00403 544 Pfam Protein kinase domain 134 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00403 544 Gene3D - 414 544 - -
Adu02g00403 544 Gene3D Transferase(Phosphotransferase) domain 1 223 413 - -
Adu02g00403 544 MobiDBLite consensus disorder prediction 1 81 - -
Adu02g00403 544 PANTHER CDPK-RELATED KINASE 3 44 544 - -
Adu02g00403 544 SUPERFAMILY EF-hand 425 543 IPR011992 -
Adu02g00403 544 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00403 Adu-Chr2 4610775 4614976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00403 33 544 EF-hand Containing Proteins AT3G50530 57.143 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Adu02g00403 Pkinase 8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00403 - - gmx:100796256 833.558