Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00397 ATGACAAGCCACATTGAGAACCTTTGGGTGTTGGCCTTGGCCTCAAAATGCACACAAGAGAACATTGCATGGTCACTTTTGATCATGGCCATACTCATATGGCTAACCATGTCCTTCTATTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGAAAGTACTATTCCTACTTCTACTACTACCACCGTTACTGCTCTACTTGGACATCAAAAAAGACATCATTACCGACACAACCTCACCAAGAACAACAACGTTGCTTTTCATCAAACGAGGATAAAAATTTGATTCCTGGCCCCAAAGGATACCCTATTATTGGGAGTATGGCCCTTCTGTCTTCCCAACTAGCACACCATCGCATCCTCGCCGCTGCAAAGGCATGCAACGCCACGAGGCTGATGGCGTTCAGTTTGGGAGACACAAGGGCTATAGTCACGTGCCATCCTCATGTGGCACGTGAGATTCTTAATGGGACGGTGTTTGCTGATCGTCCCATTAAAGAATCAGCTTATAGCCTCATGTTCAACAGGGCCATCGGGTTTGCGGCCCACGGCACTTATTGGCGCACCCTCCGCCGCATCGCCGCCACACACCTTTTTTCACCTAAACAAATTAAGGCCTCGGAGACTCAGAGAGCCGAAATCGCCACAAATATGGCCGCCATACTCGGCGGTGCTTGCGGTGGCGCCGCCGTCACGGTTCGTGAAGTGCTCAAAACGGCGTCGTTGAGCCACATGATGAGGTTGGTTTTTGGGTATAAAAAAAACTTGGGAATGGAAGGTGAGCTCAGAGGATTAGTGGAAGAAGGATATGATCTGTTGGGTACCCTTAACTGGGGGGATCACTTGCCCTTCCTAAGGGACTTTGATTTTCAGAAAATCCGGTTCAGGTGTACGGAACTGGTTCCGAAGGTGAACCGGTTCGTTGGTTCGATCATCGATGAACACCGAACCGACAAGAACAGGAACAGCGCCAACAAGGATTTTGTTGATGTCTTGCTCTCTCTCCAAGGACCCGATAAGTTGTCTGAATCCGACATGATTGCTGTTCTTTGGGAAATGATTTTTAGGGGAACCGACACCGTCTCGGTTTTGATAGAGTGGATACTAGCAAGGATGGTCCTTCATCCAGACGTGCAACGCAAGGTTCAGGATGAGCTGGATACGGTGATTGGCTCACGTGGCACTATAACAGAGGATGACGTGGCGGCATTGGTGtacctcccggcagtggtaaaggaagttctaaggcttcaccctccgggtccacttctttcctgggcccggttggccataaccgataccatcgttgatggatatcatgtccccaaggggactacggctatggtcaacatgtgggcgatagctcgtgacccgtctgtgtggaaggacccgcttgaatttaagcccgagagattcgttgagaatgaaggaggggttgagttttctgttttcgggtcggatcttaggcttgctccttttgggtctggtcgacgggtttgccccggAAAAACCTTAGGTTTGGCTACTGTGATGTTTTGGGTGGCATCTCTCTTGCACAAGTTTGAATGGCTACCTTTAGATGGAATGGACGGAGTTGATCTCTCCGAGGTATTAAGGCTTTCTTGTGAAATGGCTAAGCCTCTCACGGTTAAGGTTTGCCCTAGGCTTATTAAGGCTAATTATGAAAATTAG 1689 0.4014 MTSHIENLWVLALASKCTQENIAWSLLIMAILIWLTMSFYYWSHPGGPAWGKYYSYFYYYHRYCSTWTSKKTSLPTQPHQEQQRCFSSNEDKNLIPGPKGYPIIGSMALLSSQLAHHRILAAAKACNATRLMAFSLGDTRAIVTCHPHVAREILNGTVFADRPIKESAYSLMFNRAIGFAAHGTYWRTLRRIAATHLFSPKQIKASETQRAEIATNMAAILGGACGGAAVTVREVLKTASLSHMMRLVFGYKKNLGMEGELRGLVEEGYDLLGTLNWGDHLPFLRDFDFQKIRFRCTELVPKVNRFVGSIIDEHRTDKNRNSANKDFVDVLLSLQGPDKLSESDMIAVLWEMIFRGTDTVSVLIEWILARMVLHPDVQRKVQDELDTVIGSRGTITEDDVAALVYLPAVVKEVLRLHPPGPLLSWARLAITDTIVDGYHVPKGTTAMVNMWAIARDPSVWKDPLEFKPERFVENEGGVEFSVFGSDLRLAPFGSGRRVCPGKTLGLATVMFWVASLLHKFEWLPLDGMDGVDLSEVLRLSCEMAKPLTVKVCPRLIKANYEN 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00397 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 492 501 IPR017972 GO:0005506|GO:0016705
Adu02g00397 562 SUPERFAMILY Cytochrome P450 95 554 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS P450 superfamily signature 355 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS P450 superfamily signature 490 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS P450 superfamily signature 499 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 Gene3D Cytochrome P450 82 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS E-class P450 group I signature 344 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS E-class P450 group I signature 364 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS E-class P450 group I signature 407 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS E-class P450 group I signature 449 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS E-class P450 group I signature 489 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PRINTS E-class P450 group I signature 499 522 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Adu02g00397 562 PANTHER CYTOCHROME P450 78A7-RELATED 1 555 - -
Adu02g00397 562 PANTHER CYTOCHROME P450 78A6 1 555 - -
Adu02g00397 562 Pfam Cytochrome P450 96 529 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00397 Adu-Chr2 4435711 4438548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00397 1 554 Cytochrome P450 AT1G01190 61.922 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00397 K20619 - gmx:100815292 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00397 02 4435711 4438548 Adu02g00397 02 4435711 4438548 ECH