Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00390 ATGCTATTCAAAACAGGATTAATCCACAGCACAAAGAAATTGCAACAAACGTTACAAGAAATTTTCTACGTTCATCAGTACCTTAAAGTTCCCGAACTCAACGAGAGCATGCAACCGAACCCACTTTACAGAAAAGTCTTTCTCTATTTGCATTCTCTTCCTTCAATTGAAGATTCTGATTTCACGAACCTCGTTACCGGAACCAACCAAAACGATATCGTTTTATGCCTCGACGCAAATCAACTCATAGAGGATCATTTTCTTGGTGCAACTCTCTACTGGTTCAACCAGAAAACCGAACCGAACCGGAATAATGAGAACCGGACCGGTTCGTTTTTGCTCAAGATCAGAAAAAACGATAAGAGGAGAATTCTCGGGGCTTATCTCCGCCACATCCACGACGTCGCCGGCGACATGGAGAGCAACGGGAAACGCGAATTGAGGCTTTTCGTGAACGCCGGAGACGGCGAGGGAGGAGTTAGGTGGAGATCGGTACCGTTCACGCATCCTTCGACGTTCGAAACGATCGCGATGGGGGAAGATCTGAGGAGCAAGGTGAAATCAGATCTGGAATTGTTCCTCCGAGGGAAAAAGTATTACCGGAAGCTCGGCCGAGCTTGGAGGCGGAGCTTCTTGCTGTACGGTCCCTCCGGCACCGGAAAATCGAGCTTCGTCGCTGCTATGGCGAATTTCCTTGGATACGACGTTTACGACGTCGATCTCGAGAATGTTCGCGGTGGCGATTCAGATCTGAAGCTCCTCCTCCTGGAGACGACGCCGAAATCGATCGTCGTCGTGGAAGATCTCGACAAGTTTGTTGTCGCCGCGACGACGGAATCATCGTTGCCGGCGGCGAGCGCCACGGGGATACAGATGCTGAATATAATGGACGGGATTCTTAGCGCGTGTTGTGGAGAAGAGCGCGTGATGGTGTTCACGATGAACAGTAAGGATGGGGTCGACCCGGATCTGCTTCGTCCGGGTCGGGTCGACGTTCACATTCATTTTCCCACGTGCGATTTCACATCGTTCAAGGAACTCGCGAGTAGCCACTTGGGTGTGAAGGAGCACAAACTGTTCCCGCGGGTGGAGGAGATTTTGGCGCGTGGGGTGAGTCTTATGATGACTGTGATGACGTTGACGGCGGAGATGGGTGCAATGCTGCATTTTAGGTTGTTCGGTTGGAGCGTATTTCGAGATTTTCCGCTCTTGCCGAGGTTATCTATGATGTTAACGTTGGAATTAGTCAGTTGTGTTTCCGAGCTTTCACAACTTATCCGGATTTTGTGGGTTGTTATCTATTTGACTTTGTTTAGAGCCGAAGTATACGGTATGCTACGTGGCAGTCGAGAGTTTTCTGTCCTCAGAGTACAGACGCCGAGCTATACTTCAGCCGTCGAGGAACATCGGAGGAGGTTGGGACTTATCCTGCTACGTTTACTTGGTTCTGTTTATATAAGATTTGTATATGACTTGATTGTGATATGTTCTCCTCATTCCGAGATATGA 1509 0.4904 MLFKTGLIHSTKKLQQTLQEIFYVHQYLKVPELNESMQPNPLYRKVFLYLHSLPSIEDSDFTNLVTGTNQNDIVLCLDANQLIEDHFLGATLYWFNQKTEPNRNNENRTGSFLLKIRKNDKRRILGAYLRHIHDVAGDMESNGKRELRLFVNAGDGEGGVRWRSVPFTHPSTFETIAMGEDLRSKVKSDLELFLRGKKYYRKLGRAWRRSFLLYGPSGTGKSSFVAAMANFLGYDVYDVDLENVRGGDSDLKLLLLETTPKSIVVVEDLDKFVVAATTESSLPAASATGIQMLNIMDGILSACCGEERVMVFTMNSKDGVDPDLLRPGRVDVHIHFPTCDFTSFKELASSHLGVKEHKLFPRVEEILARGVSLMMTVMTLTAEMGAMLHFRLFGWSVFRDFPLLPRLSMMLTLELVSCVSELSQLIRILWVVIYLTLFRAEVYGMLRGSREFSVLRVQTPSYTSAVEEHRRRLGLILLRLLGSVYIRFVYDLIVICSPHSEI 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00390 502 PANTHER BNAC04G00800D PROTEIN 1 375 - -
Adu02g00390 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 372 IPR027417 -
Adu02g00390 502 CDD AAA 208 337 - -
Adu02g00390 502 Pfam Domain associated at C-terminal with AAA 12 95 IPR025753 -
Adu02g00390 502 Pfam ATPase family associated with various cellular activities (AAA) 212 337 IPR003959 GO:0005524|GO:0016887
Adu02g00390 502 SMART AAA_5 207 340 IPR003593 -
Adu02g00390 502 PANTHER BCS1 AAA-TYPE ATPASE 1 375 - -
Adu02g00390 502 Gene3D - 160 338 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00390 Adu-Chr2 4291884 4294754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00390 203 336 Calmodulin-binding Proteins AT3G56690 28.873 1.58e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00390 - K08900 gmx:100787809 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00390 02 4291884 4294754 Adu02g00390 02 4291884 4294754 ECH
Adu06g00168 06 1979837 1981805 Adu02g00390 02 4291884 4294754 PCT