Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00307 ATGGTATATGTTAAGGCCCAGAAATCTAAGGCCTACTTCAAGAGGTATCAAGTAAAGTTTAAGAGAAGAAGAGAGGGAAAGACCGATTACAGAGCCAGGATTCGGTTGATTAACCAGGATAAGAACAAATACAACACTCCAAAGTATCGCTTTGTTGTGCGATTCACAAACAAGGATATTGTTGCACAAATAACATCCGCTAGTATTGCTGGTGATATTGTTCTTGCAGCAGCTTATTCTCATGAATTGCCCCGCTATGGTCTTGAAGTAGGCCTTACTAACTATGCTGCAGCTTATTGCACTGGACTTCTCCTTGCTCGCCGAGTCCTTAAGATGCTTGAAATGGACGAGGAGTATCAAGGAAATGTCGAGGCTACTGGTGAGGATTTCTCTGTTGAGCCTGCTGATACCAGGAGGCCATTCCGTGCTCTTCTTGATGTTGGTCTTATCAGGACCACAACTGGAAACCGTGTGTTTGGTGCCCTTAAGGGAGCTTTGGATGGGGGTTTGGATATCCCTCACAGTGAAAAGAGGTTTGCCGGTTTTGACAAAGAGAAGAAGGAGCTTGATCCCGAAGTTCACCGCAAGTATATCTTTGGTGGACATGTTGCTTCTTACATGAGGACTTTGCAGGAAGATGAACCTGAGAAATACCAGTCACATTTCAGTGAATATATCAAGCGAGGAATAGAGGCTGATGGAATTGAGTCTCTGTACAAAAAGGTTCATGCTGCCATTCGTGCTGATCCTACCATCAAGAAGTCGGGGAAACCTGCTCCTAAGGAGCACAAGAGGTACAACCTCAAGAAGCTTACCTATGAGGAGAGGAAGAATAAGTTGATTGCACGCTTGCAGGCTCTCAACAATGCTGCAGGTGGGGATGAAGATGATGATGAGGATGACGATTGA 909 0.4488 MVYVKAQKSKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQITSASIAGDIVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYQGNVEATGEDFSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSEKRFAGFDKEKKELDPEVHRKYIFGGHVASYMRTLQEDEPEKYQSHFSEYIKRGIEADGIESLYKKVHAAIRADPTIKKSGKPAPKEHKRYNLKKLTYEERKNKLIARLQALNNAAGGDEDDDEDDD 302
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00307 302 Coils Coil 270 290 - -
Adu02g00307 302 Gene3D - 1 291 - -
Adu02g00307 302 Pfam Ribosomal L18 C-terminal region 235 288 IPR025607 -
Adu02g00307 302 PANTHER RIBOSOMAL PROTEIN L5-RELATED 1 299 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu02g00307 302 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 14 175 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu02g00307 302 PANTHER PROTEIN L5, PUTATIVE-RELATED 1 299 - -
Adu02g00307 302 CDD Ribosomal_L18_L5e 41 170 - -
Adu02g00307 302 PRINTS Ribosomal protein L5 signature 20 39 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu02g00307 302 PRINTS Ribosomal protein L5 signature 43 62 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu02g00307 302 PRINTS Ribosomal protein L5 signature 84 104 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu02g00307 302 PRINTS Ribosomal protein L5 signature 144 163 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu02g00307 302 PRINTS Ribosomal protein L5 signature 164 183 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu02g00307 302 PRINTS Ribosomal protein L5 signature 206 226 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Adu02g00307 302 SUPERFAMILY Translational machinery components 11 252 - -
Adu02g00307 302 Hamap 50S ribosomal protein L18 [rplR]. 14 246 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Adu02g00307 Adu-Chr2 3334107 3336808 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00307 1 292 Cytoplasmic Ribosomal Protein Gene Family AT3G25520 83.904 0.0 514
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00307 K02932 - gmx:100818819 529.25