Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00302 ATGATTCCAATTTCCACACACATTCCTACCAAGGCTCTTAAAAAGACCATATTCATACTCTTAACAATAGCATCAAAATCAAAGTCAACTCTTGAATCAGCAATGATCACTGATGTACCTTCTTCTTCCtcctcttcctctccctccgtcaagacccgtagatggatcaaccatgtattcatcagtttcaggggtgaagacaccagaaaaggtttcacagatcacctttatgctgcactggaaagaaggggttgtatcaaaactttcaaggatgatcatgaccttgagagtggggaaatcatatctgaagggctcatcaagggaattcaagagtccatgtttgcgcttgttgtcctctcaccaaactatgcttcctcaagatggtgcttggatgagctgcaaaacatcgttgagtgcagggaaaagttcaaccaagtggtttttcctatcttctatggtgtagaaccctctgatgtaaggtatcagagaggaacctttgaagaagctttcagaaaacatgaagagaggttcaaagaagaggagggtaaagtccaaagatggagagatgcattgcaaaaagttgcaagttattccggttgggactccaaagataatcatgaggcagcattgattgaaagaattgttgatcacatacaaaaattactgattcctaagttgccatcatgggtaggaaacctcgttggtgttgaatcaaggatgaaaaagttgaattcactcattggtatgcagttggatgatgttcgctttataggtatatggggcatgggaggcataggaaaaacaacaactgccagattaatatatgaatcaatcgaagagcagttcaactttagttgctttcttgcaaacattagagaggtttctgcaacaaatggcatagttcacatccaaagggaacttctttctcatctttctgtaagaagtaattactttcataatttgtttgatggggtaaaaataatagcaaactctttgcacaacaaaaaggtcctccttgttcttgatgatataagtgaaagaagccaattagagaacttagccggaaaacaagaatggtttggtcccggtagcagaataatcatcactactagagataagcatctgctaatgacacatggcgtgcatcagacatgcgagcttgaaggcttagttcagaaagaagcccttcatttattctgtctgaaagcttttaaacaagatcaacccaaaagcaaatatcagaatttgtgctacgaagtggttgaatacacaagaggccttccattggcacttgaagtattggggtctcatctttgtggaagaactcctgaggcttggcatagtgctttaaagcaattaagaagttctccacaccctgaaatccaaaattcattgaaaataagttttgaaagtttgtcgagcacagagagagaaatgtttttggatattgcttgtttcttcaaaggcatggacaaggatgaagtagtagaagtgttagaaaattgtggtcattttccacaaattggaattgaaattttgattgaaaaatctttggtcactcttggtaggggtaataaattggaaatgcatgatttacttcaagaaatgggaaagaatatagtgtttcaagtatctccaaatgatccaggaaaacgtagtagattgtggtctcaagatgacaccagccatgtgttgacacaaaataagGGAACTGAAGCAATTCAAGCAATAGTACACTATGCTCAACCATATGAAGCAAGATGGAGCTCTGAAGCAATTCAAGCAAAAGTACGCTATACTCGACCATATGAAGCAAGATGGAGCTCTGAAGCTTTCTCCAAGACCAGCAACATAAGGTTGCTAAAGATACGTAATGTGTGTCGTCTTTCCCATGGCCTTGATTGCCttccttatgcactcagagttcttgactggcaaggatgccctctgaaaactctgccacttactgatcaactggatgttgttgacatcaatttgtcttggagcaaaattgaacaactttggcacggaagaaagattttacataagttgaagtgcatcaacttgagtttttccgataacctaaaccaaacccctgactttgtggaggttccgaatctcgaatcgttagttcttgaaggttgtacaagcctaaccgaaatccactcatctgttatgcagctcaagaaacttgttcaattgaacttaagaggctgcaaaaggctcaaagctcttccaggtaaaatggagatgagttcattaaaggttttaaatctttctggttgttcaaacatgaacactgtcccagactttgggaattgcatgggacatctagcagagcttcatttggatggaactgctgtaacagagctaccttcatcactaggatgtctggttggactTGTTCTTTTGCATTTACAGTATTGCAGGTATCTTCTTTGCCTTCCGGATACCATTCATAAGTTGAAGTCCCTCGAAGTTCTTAATGTTTCTTATTGCTCGAAACTCAGTAGCTTGCCAAAGTGCTTACAGGAAATGAATAATCTGGAAGAACTTTATGCAAGCAATACTGCCATTGAAGAACTACCCTTATGTTTATGTTATCTAGAAAACATCAAAGTAGTGTCATTTGCTGGTTGCAAAGAGTCAACATCTGAGTTAAATTGCTTTCGAGTTGCATCTGCTGTTTGCGGTCCATCCCCTTTGATAAGGTTAGATTTAAGTTATTGCAATCTACTTGCTGAATCAATACCAGATGGTTTTTGTGGCTTATCTTTACTGAGGGATTTAGATCTTTCTGGCAACAACTTTGTTAACCTACCAAGCGACATTTCTAAACACACTGCGCTTGAATATCTTCGTCTAAACTCGTGCAAGAAGCTTCAGTCATTGCCTGAGCTTCCATTAAGCATAAAAATGATAGAGGCAAGCAACTGTTCCTCATTGGTAACTTCTAAATTCCATCCATCTAGCAAATGCAGCATTTTTGCATCACCTTTACAATGGCACTTACCAAGAGAACAGAAGAGCCTGCTCAAGGGGATTTGCTTTCCGAGAACACGATTCGACATGTTTATCACAGGCAATGAAATTCCATCATGGTTTGCACCTCAAAAGTCCTCTTCCTTTGCAGAAATACCATTTCCTCATCCTTCTCCTCCAACTGAATGGCTGGGATTTGCTCTCTGTTTCTTGCTGGTAGCTGATCGGCCTCTGGGCTATTACGATGCAGAGATCACTTGTTACACGGCAACACAAACATCATTAGAGTCCCGCATACTCGTACCAGATATTCAGGCCAACAAAATAATGGTACCGTACAAAGATGATTGGAGGGCTGAGTCTCCCGTGATCACCAGGCATCTTCCTGATATGGAGCCAAAACAACCTCACCTTTACATTCTCTTTCTGTCCATTGGAGAATACCTTGAAAGAATGCATACAGGTTATGGATTTGGTTTGAGGAGTTGGTCTGGCCGTTCATTGAGAATAGTGCAGGCTGGGTGTCGTCTGGTGTGCAAGGAAGATGTTCAAGATATTTATGGAAATCATTCCCATACTTCCTCTGTAGGGCCTAAGGAAAAAAAACAAAAAACAAACAACAACGATGGACCAAGCTCATAA 3624 0.1752 MIPISTHIPTKALKKTIFILLTIASKSKSTLESAMITDVPSSSSSSSPSVKTRRWINHVFISFRGEDTRKGFTDHLYAALERRGCIKTFKDDHDLESGEIISEGLIKGIQESMFALVVLSPNYASSRWCLDELQNIVECREKFNQVVFPIFYGVEPSDVRYQRGTFEEAFRKHEERFKEEEGKVQRWRDALQKVASYSGWDSKDNHEAALIERIVDHIQKLLIPKLPSWVGNLVGVESRMKKLNSLIGMQLDDVRFIGIWGMGGIGKTTTARLIYESIEEQFNFSCFLANIREVSATNGIVHIQRELLSHLSVRSNYFHNLFDGVKIIANSLHNKKVLLVLDDISERSQLENLAGKQEWFGPGSRIIITTRDKHLLMTHGVHQTCELEGLVQKEALHLFCLKAFKQDQPKSKYQNLCYEVVEYTRGLPLALEVLGSHLCGRTPEAWHSALKQLRSSPHPEIQNSLKISFESLSSTEREMFLDIACFFKGMDKDEVVEVLENCGHFPQIGIEILIEKSLVTLGRGNKLEMHDLLQEMGKNIVFQVSPNDPGKRSRLWSQDDTSHVLTQNKGTEAIQAIVHYAQPYEARWSSEAIQAKVRYTRPYEARWSSEAFSKTSNIRLLKIRNVCRLSHGLDCLPYALRVLDWQGCPLKTLPLTDQLDVVDINLSWSKIEQLWHGRKILHKLKCINLSFSDNLNQTPDFVEVPNLESLVLEGCTSLTEIHSSVMQLKKLVQLNLRGCKRLKALPGKMEMSSLKVLNLSGCSNMNTVPDFGNCMGHLAELHLDGTAVTELPSSLGCLVGLVLLHLQYCRYLLCLPDTIHKLKSLEVLNVSYCSKLSSLPKCLQEMNNLEELYASNTAIEELPLCLCYLENIKVVSFAGCKESTSELNCFRVASAVCGPSPLIRLDLSYCNLLAESIPDGFCGLSLLRDLDLSGNNFVNLPSDISKHTALEYLRLNSCKKLQSLPELPLSIKMIEASNCSSLVTSKFHPSSKCSIFASPLQWHLPREQKSLLKGICFPRTRFDMFITGNEIPSWFAPQKSSSFAEIPFPHPSPPTEWLGFALCFLLVADRPLGYYDAEITCYTATQTSLESRILVPDIQANKIMVPYKDDWRAESPVITRHLPDMEPKQPHLYILFLSIGEYLERMHTGYGFGLRSWSGRSLRIVQAGCRLVCKEDVQDIYGNHSHTSSVGPKEKKQKTNNNDGPSS 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00302 1207 MobiDBLite consensus disorder prediction 1183 1207 - -
Adu02g00302 1207 SUPERFAMILY Toll/Interleukin receptor TIR domain 46 200 IPR035897 -
Adu02g00302 1207 Gene3D - 50 221 IPR035897 -
Adu02g00302 1207 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 63 798 IPR044974 GO:0006952
Adu02g00302 1207 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 790 996 IPR044974 GO:0006952
Adu02g00302 1207 Gene3D Ribonuclease Inhibitor 771 992 IPR032675 -
Adu02g00302 1207 Gene3D Ribonuclease Inhibitor 606 770 IPR032675 -
Adu02g00302 1207 ProSiteProfiles TIR domain profile. 55 222 IPR000157 GO:0007165
Adu02g00302 1207 SMART till_3 56 197 IPR000157 GO:0007165
Adu02g00302 1207 PRINTS Disease resistance protein signature 256 271 - -
Adu02g00302 1207 PRINTS Disease resistance protein signature 331 345 - -
Adu02g00302 1207 PRINTS Disease resistance protein signature 424 438 - -
Adu02g00302 1207 PRINTS Disease resistance protein signature 749 765 - -
Adu02g00302 1207 SUPERFAMILY "Winged helix" DNA-binding domain 460 565 IPR036390 -
Adu02g00302 1207 Pfam NB-ARC domain 252 472 IPR002182 GO:0043531
Adu02g00302 1207 Pfam TIR domain 58 220 IPR000157 GO:0007165
Adu02g00302 1207 PANTHER TMV RESISTANCE PROTEIN N-LIKE 790 996 - -
Adu02g00302 1207 PANTHER TMV RESISTANCE PROTEIN N-LIKE 63 798 - -
Adu02g00302 1207 SUPERFAMILY L domain-like 606 987 - -
Adu02g00302 1207 SMART LRR_typ_2 775 798 IPR003591 -
Adu02g00302 1207 SMART LRR_typ_2 924 947 IPR003591 -
Adu02g00302 1207 SMART LRR_typ_2 846 869 IPR003591 -
Adu02g00302 1207 Gene3D - 390 473 IPR042197 -
Adu02g00302 1207 Gene3D - 222 384 IPR027417 -
Adu02g00302 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 483 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00302 Adu-Chr2 3238500 3243266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00302 64 907 WRKY Transcription Factor Family AT4G12020 30.310 2.93e-108 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00302 - - ahf:112733264 2347.39