Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00285 ATGAACATCATGATACCTCTGCCTGCTACCTCATTGGAACACAGCCTTCTTTCCATTCCCGTCGTCAATGCAACACCACCACCACCTCCTCCACCGCCTCATTGGACGCACCATCAGCATCACAGGATGGAGGTAATGGCGCCAGCGGCAGACATGCCAGTGCCAATGCATATTACCTTACTCTCATCATCAATGTCAGGGGCAAGAAGAGAGCAAAACCAACATGCCAACAGCAACATAATCCAACATGAACCTTTACATGCGGCTTCTAGTAACAACAATAAACGGCAACAAACAGTTCATTGGACTTTACAAGAGCACAAGTTGTTTCTCCAAGGCTACGAAGAATTAGGAAAACAATGGTCAAAAATTTCAAGTGAATATGTTAAAACAAGATCTTATTCACAAATTGTTAGTCACTCTCAAAAATTCTTTAAACGCCAGGAGAAAAGAGCTAGAGGAGAAAATCTAGGAAGAAAGAGTATGCTTGACATAACTGATTATAGTACGTAA 513 0.4211 MNIMIPLPATSLEHSLLSIPVVNATPPPPPPPPHWTHHQHHRMEVMAPAADMPVPMHITLLSSSMSGARREQNQHANSNIIQHEPLHAASSNNNKRQQTVHWTLQEHKLFLQGYEELGKQWSKISSEYVKTRSYSQIVSHSQKFFKRQEKRARGENLGRKSMLDITDYST 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00285 170 Pfam Myb-like DNA-binding domain 100 143 IPR001005 -
Adu02g00285 170 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 32 168 IPR043363 -
Adu02g00285 170 ProSiteProfiles SANT domain profile. 97 149 IPR017884 -
Adu02g00285 170 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 149 IPR017930 -
Adu02g00285 170 CDD SANT 102 140 IPR001005 -
Adu02g00285 170 SUPERFAMILY Homeodomain-like 95 150 IPR009057 -
Adu02g00285 170 Gene3D - 101 150 - -
Adu02g00285 170 SMART sant 98 147 IPR001005 -
Adu02g00285 170 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 148 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00285 Adu-Chr2 3073176 3073893 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu02g00285 Myb_DNA-binding 4.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00285 - - aip:110269155 107.842