Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00280 ATGATTGCAGAGGAAATAGATGACGCAGCAATAATTGAAGAGGAGCTAAATGCTCTTTTAATGATGGATACCAAGGAGATGAAGATGATGGAAGATCTGTTTGCCTCGGGCTTGGACGACAATCAACAGCTGCATTCTTGGGATAACACTCTTTCAAACATGGATATGGAGTATAACCCAGAAAAGATGAAAGAGGAACTGGAAGCTTTTTTCATGATGGATACGAAAGAGAACTGGGAGGAGACGGAAGCTACCAAGCATTCTCAGCCTCAGCTCCAGCCGCATACAACGAACTTTGAAGAGCAATGTGCTATTGAAGTCGGTGTTAATCAACCACGTGGGCTAGAATCTCCGCCTCAGCCTTACTGTCAGTCTCTGCCTCTGCCTCTGCCTCAGCTAGAATCTCCGCTTCAGTCTCAGCATCAATCCAAGTCGCAGACGGATATAAGCAAGATGACAGAGCAGTTTTTCAATGACACTTGGGGTTATCAACCACCGTTAGAGATGATTGCCGCAGTGGGTGGTCATCAACAACCTCAGGTCTGGACTTGGGAGGAGAACAAAGCCTTTGAGTCGGTTATCGCCAGTTGTTTCCAGGATGCTATACACAATCACTGGAAAACCGTGGCTGCTCGCCTCCCTGGAAAGACTCCGGCACAGCTGCAAGAGCGATTCTTGAAACTGATGACCGACGTTAATGCTATCAAAAACGGTAATCCTGAGAACATGAACATCATGATACCTCTGCCTGCTACCCCATTGGAACACAACCTTCTTTCCATTCCCGTCGTCAATGCAACACCACCACCACCACCTCCACCGCCTCATTGGACGCACCATCAGCATCACAGGATGGAGGTAATGGCGCCAGCGGCAGACATGCCAGTGCCAATGCATATTACCTTACTCTCATCATCAATGTCAGGGGCAAGAAGAGAGCAAAACCAACATGCCAACAGCAACATAATCCAACATGAACCTTTACATGCGGCTTCTAGTAACAACAATAAACGGCAACAAACAGTTCATTGGACTTTACAAGAGCACAAGTTGTTTCTCCAAGGCTACGAAGAATTAGGAAAACAATGGTCAAAAATTTCAAGTGAATATGTTAAAACAAGAACTTATTCACAAGTTGTTAGTCACTCTCAAAAATTCTTTAAACGCCAGGAGAAAAGAGCTAGAGGAGAAAATCTAGGAAGAAAGAGTATGCTTGACATAACTGATTATAGTACGTAA 1239 0.4496 MIAEEIDDAAIIEEELNALLMMDTKEMKMMEDLFASGLDDNQQLHSWDNTLSNMDMEYNPEKMKEELEAFFMMDTKENWEETEATKHSQPQLQPHTTNFEEQCAIEVGVNQPRGLESPPQPYCQSLPLPLPQLESPLQSQHQSKSQTDISKMTEQFFNDTWGYQPPLEMIAAVGGHQQPQVWTWEENKAFESVIASCFQDAIHNHWKTVAARLPGKTPAQLQERFLKLMTDVNAIKNGNPENMNIMIPLPATPLEHNLLSIPVVNATPPPPPPPPHWTHHQHHRMEVMAPAADMPVPMHITLLSSSMSGARREQNQHANSNIIQHEPLHAASSNNNKRQQTVHWTLQEHKLFLQGYEELGKQWSKISSEYVKTRTYSQVVSHSQKFFKRQEKRARGENLGRKSMLDITDYST 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00280 412 SUPERFAMILY Homeodomain-like 175 240 IPR009057 -
Adu02g00280 412 SMART sant 340 389 IPR001005 -
Adu02g00280 412 SMART sant 178 231 IPR001005 -
Adu02g00280 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 336 391 IPR017930 -
Adu02g00280 412 Gene3D - 176 241 - -
Adu02g00280 412 SUPERFAMILY Homeodomain-like 337 392 IPR009057 -
Adu02g00280 412 Pfam Myb-like DNA-binding domain 180 228 IPR001005 -
Adu02g00280 412 Pfam Myb-like DNA-binding domain 342 385 IPR001005 -
Adu02g00280 412 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 340 390 IPR006447 GO:0003677
Adu02g00280 412 CDD SANT 344 382 IPR001005 -
Adu02g00280 412 CDD SANT 182 229 IPR001005 -
Adu02g00280 412 ProSiteProfiles Myb-like domain profile. 182 229 IPR001005 -
Adu02g00280 412 ProSiteProfiles SANT domain profile. 339 391 IPR017884 -
Adu02g00280 412 Gene3D - 343 392 - -
Adu02g00280 412 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 179 410 IPR043363 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00280 Adu-Chr2 2988266 2989709 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu02g00280 Myb_DNA-binding 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00280 - - aip:110269155 292.352