LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Adu02g00279	ATGATTGCAGAGGAAATAGATGACGCAGCAATAATTGAAGAGGAGCTAAATGCTCTTTTAATGATGGATACCAAGGAGATGAAGATGATGGAAGATCTGTTTGCCTCGGGCTTGGACGACAATCAACAGCTGCATTCTTGGGATAACACTCTTTCAAACATGGATATGGAGTATAACCCAGAAAAGATGAAAGAGGAACTGGAAGCTTTTTTCATGATGGATACGAAAGAGAACTGGGAGGAGACGGAAGCTACCAAGCATTCTCAGCCTCAGCTCCAGCCGCATACAACGAACTTTGAAGAGCAATGTGCTATTGAAGTCGGTGTTAATCAACCACGTGGGCTAGAATCTCCGCCTCAGCCTCTGCCTCTGCCTCAGCTAGAATCTCCACCTCAGCCTACCTCCCAGTCTCTGCCTCTGCCTCTGCCTCTGCCTCAGCTAGAATCTCCACCTCAGCCTACCTCCCAGTCTCTGCCTCTGCCTCTGCCTCTGCCTCAGCTAGAATCTCCGCTTCAGTCTCAGCATCAATCCAAGTCGCAGACGGATATAAGCAAGATGACAGAGCAGTTTTTCAATGACACTTGGGGTTATCAACCACCGTTAGAGATGATTGCCGCAGTGGGTGGTAATCAACAACCTCAGGTCTGGACTTGGGAGGAGAACAAAGCCTTTGAGTCGGTTATCGCCAATTGTTTCCAGGATGCTATACACAATCACTGGAAAACCGTAGCTGCTCGCCTCCCTGGAAAGACTCCGGCACAGCTGCAAGAGCGATTCTTGAAACTGATGACCGAGGTTAATGCTATCAAAAACGGTAATCCTGAGAACATGAACATCATGATACCTCTGCCTGCTACCCCATTGGAACACAACCTTCTTTCCATTCCCGTCGTCAATGCAACACCACCACCACCACCTCCACCGCCTCATTGGACGCACCATCAGCATCACAGGATGGAGGTAATGGCGCCAGCGGCAGACATGCCAGTGCCAATGCATATTACCTTACTCTCATCATCAATGTCAGGGGCAAGAAGAGAGCAAAACCAACATGCCAACAGCAACATAATCCAACATGAACCTTTACATGCGGCTTCTAGTAACAACAATAAACGGCAACAAACAGTTCATTGGACTTTACAAGAGCACAAGTTGTTTCTCCAAGGCTACGAAGAATTAGGAAAACAATGGTCAAAAATTTCAAGTGAATATGTTAAAACAAGAACTTATTCACAAGTTGTTAGTCACTCTCAAAAATTCTTTAAACGCCAGGAGAAAAGAGCTAGAGGAGAAAATCTAGGAAGAAAGAGTATGCTTGACATAACTGATTATAGTACGTAA	1341	0.4601	MIAEEIDDAAIIEEELNALLMMDTKEMKMMEDLFASGLDDNQQLHSWDNTLSNMDMEYNPEKMKEELEAFFMMDTKENWEETEATKHSQPQLQPHTTNFEEQCAIEVGVNQPRGLESPPQPLPLPQLESPPQPTSQSLPLPLPLPQLESPPQPTSQSLPLPLPLPQLESPLQSQHQSKSQTDISKMTEQFFNDTWGYQPPLEMIAAVGGNQQPQVWTWEENKAFESVIANCFQDAIHNHWKTVAARLPGKTPAQLQERFLKLMTEVNAIKNGNPENMNIMIPLPATPLEHNLLSIPVVNATPPPPPPPPHWTHHQHHRMEVMAPAADMPVPMHITLLSSSMSGARREQNQHANSNIIQHEPLHAASSNNNKRQQTVHWTLQEHKLFLQGYEELGKQWSKISSEYVKTRTYSQVVSHSQKFFKRQEKRARGENLGRKSMLDITDYST	446

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Adu02g00279	446	CDD	SANT	216	263	IPR001005	-
	Adu02g00279	446	CDD	SANT	378	416	IPR001005	-
	Adu02g00279	446	ProSiteProfiles	SANT domain profile.	373	425	IPR017884	-
	Adu02g00279	446	ProSiteProfiles	Myb-like domain profile.	216	263	IPR001005	-
	Adu02g00279	446	PANTHER	DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED	213	444	IPR043363	-
	Adu02g00279	446	Pfam	Myb-like DNA-binding domain	376	419	IPR001005	-
	Adu02g00279	446	Pfam	Myb-like DNA-binding domain	214	262	IPR001005	-
	Adu02g00279	446	MobiDBLite	consensus disorder prediction	111	182	-	-
	Adu02g00279	446	SUPERFAMILY	Homeodomain-like	371	426	IPR009057	-
	Adu02g00279	446	SMART	sant	374	423	IPR001005	-
	Adu02g00279	446	SMART	sant	212	265	IPR001005	-
	Adu02g00279	446	SUPERFAMILY	Homeodomain-like	209	273	IPR009057	-
	Adu02g00279	446	TIGRFAM	myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class	374	424	IPR006447	GO:0003677
	Adu02g00279	446	Gene3D	-	209	275	-	-
	Adu02g00279	446	MobiDBLite	consensus disorder prediction	116	166	-	-
	Adu02g00279	446	Gene3D	-	377	426	-	-
	Adu02g00279	446	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	370	425	IPR017930	-
	Adu02g00279	446	MobiDBLite	consensus disorder prediction	167	182	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Adu02g00279	Adu-Chr2	2983046	2984591	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB	Adu02g00279		Myb_DNA-binding	7.2e-07	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Adu02g00279	-		-	aip:110269155	290.041