Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00254 ATGGATTATTCCCCTTTTTACCCCTCTCTTTTTCCTTCTATCCCTTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCATGTCCTCTTTCTTTTCCTCTCCTCCACCGCCTTCACTGCNNNNNNNNNNNNNNCGGTTACTCCATAGCCATAGCACTCGGCTTCCTTTTCCTCCTCTCCACAATCATCCTCTCTTCCTACCTCTGCTGCCGCGCTCTCCGCCACAACAACGACAACAATAACCGCCGCAGGAACCAAAACGACGGTGTCGTTTTGCCACGTGTCATTTTCGTAGCTGAGAACGACGTTGAAAATAACCAGCCTGGTGGAGGAAACGACAGCGCCGTTTTGGGTCTGGACCAGATCGTAATTAACTCGTACCCTAAGTTTCAGTTTAACGGCAACAACGACGTTGATGTTGACAGCATGTGTTCGATTTGTTTGTGTGAGTACAAGGATTCGGAGATGCTGAGGATGATGCCGGAGTGTCACCACTGCTTCCACGTGTCATGTCTTGATTCGTGGCTCAAGCTTAATGGCTCTTGCCCTGTTTGCCGGAACTCTCCGATGCCGACGCCGCTACCCACGCCGCTGCAGGAGGTGGTGCCGCTCTCTCTCTATGCCGCTGATAGGAGGGGAAGGAGTTGA 648 0.5108 MDYSPFYPSLFPSIPSSSSPPPPPPPPCPLSFPLLHRLHCXXXXXGYSIAIALGFLFLLSTIILSSYLCCRALRHNNDNNNRRRNQNDGVVLPRVIFVAENDVENNQPGGGNDSAVLGLDQIVINSYPKFQFNGNNDVDVDSMCSICLCEYKDSEMLRMMPECHHCFHVSCLDSWLKLNGSCPVCRNSPMPTPLPTPLQEVVPLSLYAADRRGRS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00254 215 Pfam Ring finger domain 143 186 IPR001841 -
Adu02g00254 215 ProSiteProfiles Zinc finger RING-type profile. 144 186 IPR001841 -
Adu02g00254 215 SUPERFAMILY RING/U-box 136 191 - -
Adu02g00254 215 SMART ring_2 144 185 IPR001841 -
Adu02g00254 215 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 190 IPR013083 -
Adu02g00254 215 PANTHER RING-H2 FINGER PROTEIN ATL67 44 213 IPR044289 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00254 Adu-Chr2 2836243 2836890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00254 46 206 C3H Transcription Factor Family AT5G07040 39.264 3.61e-34 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00254 - - adu:107472862 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00254 02 2836243 2836890 Adu02g00254 02 2836243 2836890 ECH
Adu04g02513 04 111358555 111359112 Adu02g00254 02 2836243 2836890 PCT