Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu02g00251 | ATGGAAAACCAAGACCCTTCACCACCACCACCACCACAATTGTTGCTACCACCACCCAAACAAGATCATCATCACTCTCACAATGATAATAATATTCATGATGAGTCACAATACAATCCATTGTTCTTCTTGCCACCACCACCTTCTCCTTCTTCTTCCTCCATGATGATGATGCAAAACCCTTTGGTGCAAGAAAATATTGATTGGGTTAGTTTCTTCTCTAATGAACAAAACAACAACTTGTTTATTGGAGATAATCATAATACCAACAAAGAAACAATGGAATGTGCTTCTTCTTCTTTTTATGCTTCAACTTCTACCTCTACTACTTCTATGCCGTCTCGGATGACCGAGGTTCATCAGAGCGGCGAGGATGAGAAAAAGAAAGGAGGAAGATTGATGAAGAAGAAGACGAAGCCGAGGTTTGCATTTCAAACAAGAAGTGCAGATGATATTCTTGATGATGGTTACCGATGGAGAAAATATGGACAGAAATCTGTGAAGAACAGCATGTATCCAAGAAGCTACTACCGGTGCACTCATCATACATGCAATGTGAAGAAACAAGTTCAAAGGTTATCCAAAGACACAAGCATAGTGGTGACAACTTATGAGGGAATTCATAATCACCCATGTGAGAAGCTCATGGAAACCCTAACTCCTCTTCTCAAGCAAATGCAATTTCTAGCTAGCTTCTAA | 699 | 0.3991 | MENQDPSPPPPPQLLLPPPKQDHHHSHNDNNIHDESQYNPLFFLPPPPSPSSSSMMMMQNPLVQENIDWVSFFSNEQNNNLFIGDNHNTNKETMECASSSFYASTSTSTTSMPSRMTEVHQSGEDEKKKGGRLMKKKTKPRFAFQTRSADDILDDGYRWRKYGQKSVKNSMYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLASF | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu02g00251 | 232 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
Adu02g00251 | 232 | SMART | WRKY_cls | 153 | 212 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu02g00251 | 232 | SUPERFAMILY | WRKY DNA-binding domain | 146 | 212 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu02g00251 | 232 | ProSiteProfiles | WRKY domain profile. | 148 | 213 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu02g00251 | 232 | PANTHER | WRKY TRANSCRIPTION FACTOR 43-RELATED | 47 | 228 | - | - | |
Adu02g00251 | 232 | MobiDBLite | consensus disorder prediction | 104 | 118 | - | - | |
Adu02g00251 | 232 | Gene3D | WRKY domain | 136 | 212 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Adu02g00251 | 232 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 47 | 228 | IPR044810 | GO:0003700 | |
Adu02g00251 | 232 | Pfam | WRKY DNA -binding domain | 154 | 211 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Adu02g00251 | 232 | MobiDBLite | consensus disorder prediction | 104 | 138 | - | - | |
Adu02g00251 | 232 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu02g00251 | Adu-Chr2 | 2813241 | 2815736 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu02g00251 | 128 | 232 | WRKY Transcription Factor Family | AT5G41570 | 73.832 | 8.16e-57 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Adu02g00251 | WRKY | 2.4e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu02g00251 | - | - | gmx:100810669 | 218.394 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu02g00251 | 02 | 2813241 | 2815736 | Adu02g00251 | 02 | 2813241 | 2815736 | ECH |