Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00245 ATGGACGACGATTGGGATCTCCACGCCGTTGTTAGAGGCTGCGCCACCATTTCCTCCACCTCTTCCACTACCACTACCACCACCTCCACCACCACCACTTCCTACCAACCTCCACCTTCTTCTTCATGTGGGTTCTTTAACGAACAACAAAGCAATGTTTTTTCGGTTTCCAACAACAACCCTTTTGAATTAAGAAGCTCCATTCAGGAACTTCAGCATAATCATAATCTTTGCAAGCCTTTCTTCTTCAAATCACAGCCTTTTCAGTCTTTTCAATCCTCTTCTTCTTCATCATCACCACCCAATTCAGCTCTGACACAACATAAACAGCAGCAACAGAATTGTAATAACGGTAAGAACCCTCACCATGCAGGTTCAGCTACCACCCCACGATCTAAAAGAAGGAAGAATCAGCTTAAGAACGTTTGTCAAGTTTCAGCTGAGAATCTCTCCTCAGACGTATGGGCATGGAGGAAATATGGACAGAAACCCATCAAAGGTTCACCATATCCAAGAGGATATTATAGATGTAGCAGCTCAAAAGGATGTTTGGCTAGAAAACAAGTTGAAAGGGACAGATCAGATCCAACAAAGTTCATAGTTACATTCACTGGTGTACACAACCACCCTGCTCCAACTCATAGAAACTCACTTGCTGGCTCTTCACGCCAAAAGCTACAAACACCTGAAATAGCCACTACAGGGGACACTGAAATGGTCCTCACAATGAAGCCGGTCTCGATTTTGGCTTCTCCTTCCACTTCAGGAGTGGAAGAAGAGGCTGAAACCGAGGCCACACCGGCACAGAAGTCGGAGAGCGAAGAGGACAACATGGAGGATTATTTGATGAATGATGATGATGGTGGGTTTGAGGAAACTGAGTTTGGTTCACCAGATATGGAGATAACTGATGATTTCTTTGAAGGGTTGGATGAACTGACAACAGCCACTGATGGAGACTCATGCTTTTCAACAAGTGTTCCTAATCCTTCCCTTCCTCCTTTTGTGGCCAATAGTGCTGCCACTGCTGCTGGTGGTAGCTGA 1044 0.4521 MDDDWDLHAVVRGCATISSTSSTTTTTTSTTTTSYQPPPSSSCGFFNEQQSNVFSVSNNNPFELRSSIQELQHNHNLCKPFFFKSQPFQSFQSSSSSSSPPNSALTQHKQQQQNCNNGKNPHHAGSATTPRSKRRKNQLKNVCQVSAENLSSDVWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERDRSDPTKFIVTFTGVHNHPAPTHRNSLAGSSRQKLQTPEIATTGDTEMVLTMKPVSILASPSTSGVEEEAETEATPAQKSESEEDNMEDYLMNDDDGGFEETEFGSPDMEITDDFFEGLDELTTATDGDSCFSTSVPNPSLPPFVANSAATAAGGS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00245 347 MobiDBLite consensus disorder prediction 278 302 - -
Adu02g00245 347 Gene3D WRKY domain 135 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu02g00245 347 SUPERFAMILY WRKY DNA-binding domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Adu02g00245 347 MobiDBLite consensus disorder prediction 263 277 - -
Adu02g00245 347 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 347 IPR044810 GO:0003700
Adu02g00245 347 MobiDBLite consensus disorder prediction 250 302 - -
Adu02g00245 347 MobiDBLite consensus disorder prediction 20 42 - -
Adu02g00245 347 SMART WRKY_cls 151 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu02g00245 347 MobiDBLite consensus disorder prediction 206 226 - -
Adu02g00245 347 MobiDBLite consensus disorder prediction 209 226 - -
Adu02g00245 347 MobiDBLite consensus disorder prediction 92 127 - -
Adu02g00245 347 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 347 - -
Adu02g00245 347 ProSiteProfiles WRKY domain profile. 146 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Adu02g00245 347 MobiDBLite consensus disorder prediction 92 137 - -
Adu02g00245 347 Pfam WRKY DNA -binding domain 153 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00245 Adu-Chr2 2757934 2759567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00245 1 346 WRKY Transcription Factor Family AT4G01250 44.986 9.93e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Adu02g00245 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00245 K13425 - gmx:100815829 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00245 02 2757934 2759567 Adu05g03442 05 106848085 106851214 ECH
Adu02g00245 02 2757934 2759567 Adu02g00245 02 2757934 2759567 ECH
Adu02g00245 02 2757934 2759567 Adu04g02505 04 111275460 111277935 ECH
Adu09g00311 09 3291242 3298122 Adu02g00245 02 2757934 2759567 ECH
Adu04g02505 04 111275460 111277935 Adu02g00245 02 2757934 2759567 PCT