Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00244 ATGTTCACAACACAACAACTCAGAGAGAGTGAAGAACAGTTGAAGCTAACCACCACCACGCACCGCAACGTGATGGTGGACGAAGAAGGTGAATTCGCCGGCACAATTTGCTCCATTTGCTACGAAGATCTCAAACCAGTTTCCGAAGATCTTCAATCTATCTCCGTTTGCGGCCACGTCTTCCACGAGCTTTGCTTGCAGCAATGGTTCGAGTACTGTTCGAAAGCGAAGAAGCACACTTGCCCCGTTTGCAAGCAGAGTTGCAGGGTCGGCGATGCTTGCAGGCTTTACTTCCAATCGGTGGGAGATGTGGTCGAATCTGTTATGCATCGGAAGCCATTTGATTCCGAAGAAGATTCCGGAGTTTTGAGAAAGGAAGTGAACAGGTTGGAGGACAGGCTTTCGGGGCTTAGTTCAGAGTTGGAGAAGAAGGGGAAGGAAATTGAGCAGCTCACGAAGGAGCTTGGTGCTTGCAAGGAGAAAGCAAAGATTGAAATAGCATTAAAAAATGAGGCCTTGAGTCAAAAAGCATCCATGCAAACTGAGCTTCGTATGAAGTCAGAGGAGCTTGAGAAGTCAACTTTTGAGTGCTATTCATTACAAAAAAGAAATATCACTTTGGCTAAAGAAATTGCGGCATTTAAATTAGTCTCTGATCTTGACCTTAATGAAGAGGAAGTTTTGAAGTATGCAACTTTGGGTAACGGGTTTAATGATAAAGATACGATAGACACATTGAGCAGATCTATGGTTCGGCGTAACAGGGATTACAAAGATCTAATAGCTAAACGCAATGAATTAGTGGCCAAGTGCAATCATCTAGAAAAGGGTGAGGCTCGGTACAGTAAAAAGCTTGAGAAGGCTAAGGAGAAGATTCTTAAATTGAAGGCTAGGGTACAAGAACTAGAGACAGCTGCAGAAGTAAGAGAGAACCATTATCTGAAGTCTTTGAAAGCTTCAAAGATGAATAAGTGTTCAAATAATCTTGAAAACAACCTCAGTTCTAAGAATGATGTACCCACGACCAGCAATACTCCATTAAATGAGCAAACTAAACAAACTTCACCCAAATCTGAAATGGACTTGAGTGTGAGCAACAGTAAATCTCTACAATTTTCAAGGATAGTCAACTGCATTCCTACCGAAAGTAAAGCTGTAAATGTTAGTAATGAAAATAAATCTACCCCTGCTCTTCGAAAAGAGAGGGATTTTATATCTCTTGATGCTGATGCTTCAGAATTTACTGAACCTTTGTCTGGAGGGTCAAGACGTGACTGCAATGATCGATACAGGGATGGTGCTGCTCTTAGCAAGCCTACTGTAGCCAAGTCAGATGCAGCATCCGAAAAGAAGGAAGAAACAGCAGCTCAAGGAACATGTAACTTGGCTGATTCTTCAAGAATTGACATTGATGTTGAAATGACGAAAAATGATGTCATCGATTTGGATGATGATATAACATTACTCGATAAACAAGTTCAACCCAAGGTTAATATTATAAAGGAGTCACCACCAATAATTGCAAATCCAGGGGACATTTGTTTTTCTGGCGGATTGCTTGGTCCTGATGGATCACATAGGTACTTGGGTAAATGGTGCAAGCGTAGAAAAAATGGCGAATCGCAATCGGTAGATGGAGGATTGATAGCTGTTGGGGCTGATGGTAGAGGTGGCAGAATTAAAGTTCTAAGGACCGCAGGCCAAACCTTCATGGATGACAAGGAAAATGACAAGGAATCAAAAAGGTTAAAGGTTGGACCTAAGAGAAGTAGTTTGCGACCCCAGGGATGTCTGCAGATAGATCACTTCTTTGGCAGGGTTAATCACTAA 1830 0.4213 MFTTQQLRESEEQLKLTTTTHRNVMVDEEGEFAGTICSICYEDLKPVSEDLQSISVCGHVFHELCLQQWFEYCSKAKKHTCPVCKQSCRVGDACRLYFQSVGDVVESVMHRKPFDSEEDSGVLRKEVNRLEDRLSGLSSELEKKGKEIEQLTKELGACKEKAKIEIALKNEALSQKASMQTELRMKSEELEKSTFECYSLQKRNITLAKEIAAFKLVSDLDLNEEEVLKYATLGNGFNDKDTIDTLSRSMVRRNRDYKDLIAKRNELVAKCNHLEKGEARYSKKLEKAKEKILKLKARVQELETAAEVRENHYLKSLKASKMNKCSNNLENNLSSKNDVPTTSNTPLNEQTKQTSPKSEMDLSVSNSKSLQFSRIVNCIPTESKAVNVSNENKSTPALRKERDFISLDADASEFTEPLSGGSRRDCNDRYRDGAALSKPTVAKSDAASEKKEETAAQGTCNLADSSRIDIDVEMTKNDVIDLDDDITLLDKQVQPKVNIIKESPPIIANPGDICFSGGLLGPDGSHRYLGKWCKRRKNGESQSVDGGLIAVGADGRGGRIKVLRTAGQTFMDDKENDKESKRLKVGPKRSSLRPQGCLQIDHFFGRVNH 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00244 609 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 90 IPR013083 -
Adu02g00244 609 SMART ring_2 37 84 IPR001841 -
Adu02g00244 609 CDD RING-H2 37 85 - -
Adu02g00244 609 ProSiteProfiles Zinc finger RING-type profile. 37 85 IPR001841 -
Adu02g00244 609 Pfam Ring finger domain 36 85 IPR001841 -
Adu02g00244 609 Coils Coil 127 161 - -
Adu02g00244 609 PANTHER RING ZINC FINGER PROTEIN-RELATED 25 607 - -
Adu02g00244 609 MobiDBLite consensus disorder prediction 326 364 - -
Adu02g00244 609 MobiDBLite consensus disorder prediction 573 592 - -
Adu02g00244 609 MobiDBLite consensus disorder prediction 415 458 - -
Adu02g00244 609 Coils Coil 271 305 - -
Adu02g00244 609 SUPERFAMILY RING/U-box 36 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00244 Adu-Chr2 2739313 2743064 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00244 516 608 C3H Transcription Factor Family AT4G01270 41.000 1.26e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00244 K11985 - gmx:100812811 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00244 02 2739313 2743064 Adu02g00244 02 2739313 2743064 ECH