Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu02g00240 | ATGCTCCGGCAACCGTGCCATCAGCTGCGTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAGTCTAGGGAGAGCTGGACCGAGCAGGAGCATGACAAGTTTCTAGAAGCTCTTCAATTATTTGATCGTGATTGGAAGAAAATTGAAGCATTTGTCGGCTCAAAAACTGTTATCCAGATACGGAGTCATGCACAAAAGTATTTCCTTAAAGTCCAGAAGAATGGAACAAGTGAACATGTACCTCCCCCTCGGCCAAAGAGAAAAGCTTCTCATCCATACCCTCAAAAAGCTCCCAAGAGTGCTCCTACTGCATCCCATGTCACTGGGCCATTGCAATCTTCCTCAGCTTTCATTGAACCTGCATACATTTATAGCCCGGATTCATCATCTGTGCTAGGAACTCCAGTAACCAGTGTGCCTTTATCATCTTGGAATTATAACACCATTCCACCAAGCAATGTGCCCCCAAGCAATGTGCCACCAGCAACTAAAGATGATATGGGATTGGCTGGAGCTGGACAAGCTGTCCCTCTTACTTGTTGCTATAGCAGCAGTAATGAGAACACCCCTCCAACTTGGCCAAGTAACAATGGGTTTGAACAAAGAAACCAGACCAAGCCAATTAAAGTTATGCCAGATTTTGCACAAGTCTACAGCTTCATTGGCAGTGTATTTGATCCCAATTCTACTAATCATCTCCAGAGGCTGAAACAGATGGACCCAATAAATATGGAAACGGTACTGTTGTTGATGAGAAACCTCTCCATGAATCTAATGAGTCCTGAATTTGAGGATCATAAGAGGCTGCTTTCGTCATACGGAGCCAACCCTGAAGAGGCAAAGTTTGTCAATCCTTGCAGCAAGTTGCTCAAATCTGAGAGTGCTGTTCTAACTGCTTAA | 927 | 0.4196 | MLRQPCHQLRLXXXXXXXXXXXXXXXXXXKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKASHPYPQKAPKSAPTASHVTGPLQSSSAFIEPAYIYSPDSSSVLGTPVTSVPLSSWNYNTIPPSNVPPSNVPPATKDDMGLAGAGQAVPLTCCYSSSNENTPPTWPSNNGFEQRNQTKPIKVMPDFAQVYSFIGSVFDPNSTNHLQRLKQMDPINMETVLLLMRNLSMNLMSPEFEDHKRLLSSYGANPEEAKFVNPCSKLLKSESAVLTA | 308 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu02g00240 | 308 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 30 | 79 | IPR006447 | GO:0003677 | |
Adu02g00240 | 308 | PANTHER | MYB TRANSCRIPTION FACTOR | 29 | 303 | - | - | |
Adu02g00240 | 308 | Gene3D | - | 35 | 82 | - | - | |
Adu02g00240 | 308 | ProSiteProfiles | Myb-like domain profile. | 27 | 77 | IPR001005 | - | |
Adu02g00240 | 308 | PANTHER | SWI/SNF COMPLEX-RELATED | 29 | 303 | - | - | |
Adu02g00240 | 308 | SMART | sant | 31 | 79 | IPR001005 | - | |
Adu02g00240 | 308 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 27 | 81 | IPR017930 | - | |
Adu02g00240 | 308 | SUPERFAMILY | Homeodomain-like | 29 | 82 | IPR009057 | - | |
Adu02g00240 | 308 | MobiDBLite | consensus disorder prediction | 80 | 119 | - | - | |
Adu02g00240 | 308 | Pfam | Myb-like DNA-binding domain | 32 | 77 | IPR001005 | - | |
Adu02g00240 | 308 | CDD | SANT | 34 | 77 | IPR001005 | - | |
Adu02g00240 | 308 | ProSiteProfiles | SANT domain profile. | 30 | 83 | IPR017884 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu02g00240 | Adu-Chr2 | 2680460 | 2684535 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Adu02g00240 | Myb_DNA-binding | 2.5e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu02g00240 | - | - | adu:107472769 | 555.444 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu02g00240 | 02 | 2680460 | 2684535 | Adu02g00240 | 02 | 2680460 | 2684535 | ECH |