Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00240 ATGCTCCGGCAACCGTGCCATCAGCTGCGTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAGTCTAGGGAGAGCTGGACCGAGCAGGAGCATGACAAGTTTCTAGAAGCTCTTCAATTATTTGATCGTGATTGGAAGAAAATTGAAGCATTTGTCGGCTCAAAAACTGTTATCCAGATACGGAGTCATGCACAAAAGTATTTCCTTAAAGTCCAGAAGAATGGAACAAGTGAACATGTACCTCCCCCTCGGCCAAAGAGAAAAGCTTCTCATCCATACCCTCAAAAAGCTCCCAAGAGTGCTCCTACTGCATCCCATGTCACTGGGCCATTGCAATCTTCCTCAGCTTTCATTGAACCTGCATACATTTATAGCCCGGATTCATCATCTGTGCTAGGAACTCCAGTAACCAGTGTGCCTTTATCATCTTGGAATTATAACACCATTCCACCAAGCAATGTGCCCCCAAGCAATGTGCCACCAGCAACTAAAGATGATATGGGATTGGCTGGAGCTGGACAAGCTGTCCCTCTTACTTGTTGCTATAGCAGCAGTAATGAGAACACCCCTCCAACTTGGCCAAGTAACAATGGGTTTGAACAAAGAAACCAGACCAAGCCAATTAAAGTTATGCCAGATTTTGCACAAGTCTACAGCTTCATTGGCAGTGTATTTGATCCCAATTCTACTAATCATCTCCAGAGGCTGAAACAGATGGACCCAATAAATATGGAAACGGTACTGTTGTTGATGAGAAACCTCTCCATGAATCTAATGAGTCCTGAATTTGAGGATCATAAGAGGCTGCTTTCGTCATACGGAGCCAACCCTGAAGAGGCAAAGTTTGTCAATCCTTGCAGCAAGTTGCTCAAATCTGAGAGTGCTGTTCTAACTGCTTAA 927 0.4196 MLRQPCHQLRLXXXXXXXXXXXXXXXXXXKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKASHPYPQKAPKSAPTASHVTGPLQSSSAFIEPAYIYSPDSSSVLGTPVTSVPLSSWNYNTIPPSNVPPSNVPPATKDDMGLAGAGQAVPLTCCYSSSNENTPPTWPSNNGFEQRNQTKPIKVMPDFAQVYSFIGSVFDPNSTNHLQRLKQMDPINMETVLLLMRNLSMNLMSPEFEDHKRLLSSYGANPEEAKFVNPCSKLLKSESAVLTA 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00240 308 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 30 79 IPR006447 GO:0003677
Adu02g00240 308 PANTHER MYB TRANSCRIPTION FACTOR 29 303 - -
Adu02g00240 308 Gene3D - 35 82 - -
Adu02g00240 308 ProSiteProfiles Myb-like domain profile. 27 77 IPR001005 -
Adu02g00240 308 PANTHER SWI/SNF COMPLEX-RELATED 29 303 - -
Adu02g00240 308 SMART sant 31 79 IPR001005 -
Adu02g00240 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 81 IPR017930 -
Adu02g00240 308 SUPERFAMILY Homeodomain-like 29 82 IPR009057 -
Adu02g00240 308 MobiDBLite consensus disorder prediction 80 119 - -
Adu02g00240 308 Pfam Myb-like DNA-binding domain 32 77 IPR001005 -
Adu02g00240 308 CDD SANT 34 77 IPR001005 -
Adu02g00240 308 ProSiteProfiles SANT domain profile. 30 83 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00240 Adu-Chr2 2680460 2684535 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Adu02g00240 Myb_DNA-binding 2.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00240 - - adu:107472769 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00240 02 2680460 2684535 Adu02g00240 02 2680460 2684535 ECH