Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00236 ATGTTCACAACACAACAACTCAGAGAGAGTGAAGAACAGTTGAAGCTCACCACCACCACGCACCGCAACGTGATGGTGGACGAAGAAGGTGAATTCGCCGGCACAATCTGCTCCATTTGCTACGAAGATCTCAAACCAGTTTCCGAAGATCTTCAATCTATCTCCATTTGCGGCCACGTCTTCCACGAGCTATGCTTGCAGCAATGGTTCGAGAACTGTTCCAGAGTGAAGAAGCACACTTGCCCCGTTTGCAAGCAGAGTTGCAGGGTCAGCGATGCTTGCAGGCTTTACTTCCAATCGGTGGGAGATGTGGTCGAATCTGTTATGCATCGGAAGCCATTTGATTCTGAAGAAGATTCCGGAGTTTTGAGAAAGGAAGTGACGAGGTTGGAGGTTTCGGGGATTAGTTCATAG 414 0.4879 MFTTQQLRESEEQLKLTTTTHRNVMVDEEGEFAGTICSICYEDLKPVSEDLQSISICGHVFHELCLQQWFENCSRVKKHTCPVCKQSCRVSDACRLYFQSVGDVVESVMHRKPFDSEEDSGVLRKEVTRLEVSGISS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00236 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 131 IPR013083 -
Adu02g00236 137 PANTHER RING ZINC FINGER PROTEIN-RELATED 25 132 - -
Adu02g00236 137 CDD RING-H2 37 85 - -
Adu02g00236 137 ProSiteProfiles Zinc finger RING-type profile. 37 85 IPR001841 -
Adu02g00236 137 SMART ring_2 37 84 IPR001841 -
Adu02g00236 137 Pfam Ring finger domain 36 85 IPR001841 -
Adu02g00236 137 SUPERFAMILY RING/U-box 36 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00236 Adu-Chr2 2626312 2626885 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00236 28 131 C3H Transcription Factor Family AT4G01270 61.538 1.33e-40 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00236 K11985 - gmx:100812811 173.326