Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00229 ATGGCCACTTCCGCCGCTGCGCCGCGCCAGCTCTCTCAGAAGGAGCAAGACATCCAGATGATGCTTGCGGCTGAGGTGCATTTGGGAACCAAAAACTGCGACTTCCAGATGGAACGCTATGTCTTCAAACGCCGCAATGATGGTATTTACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAACTTGCTGCTAGGATTATTGTCGCCATCGAGAATCCGCAGGACATCATTGTTCAGTCTGCTAGGCCATATGGTCAGAGGGCAGTCTTGAAATTTGCCCAATACACCGGTGCAAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGACATCCTATAACGAGCCTCGCCTTCTTATTCTGACTGATCCAAGGACTGATCATCAGCCCATTAAGGAAGGTGCTCTTGGAAATATTCCAACAATTGCCTTTTGCGATACTGATTCTCCAATGCGagaacctgaagaggccaagCAACAAGAGGAGGAGGAAGCACCAGCTGCCCCAGAATATGCCATTCAAGACTTCGGTGCTGCTGGCATTGCCGGTTTCCCCACAGCTGATGGTGAATGGACGGCTGTCACAGAACAACCCTGGCCCGAGGCAGTTCCACAACAACCTATTGCAGCTGCGCCTGCTGATTGGGCCCCAGATACTTCTGCAGCTGCAGGTGATTGGGAACCGGTTCCAGCTCCTCAGCCTTCCGTTCCGGCACCCGGAGCTGTTGCTCCCACTGGTTGGGAATAG 765 0.5072 MATSAAAPRQLSQKEQDIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSYNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMREPEEAKQQEEEEAPAAPEYAIQDFGAAGIAGFPTADGEWTAVTEQPWPEAVPQQPIAAAPADWAPDTSAAAGDWEPVPAPQPSVPAPGAVAPTGWE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00229 254 CDD RPS2 21 158 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 SUPERFAMILY Ribosomal protein S2 13 157 IPR023591 -
Adu02g00229 254 ProSitePatterns Ribosomal protein S2 signature 2. 122 146 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 PANTHER 40S RIBOSOMAL PROTEIN SA 8 158 - -
Adu02g00229 254 Gene3D - 17 170 - -
Adu02g00229 254 MobiDBLite consensus disorder prediction 203 254 - -
Adu02g00229 254 MobiDBLite consensus disorder prediction 155 171 - -
Adu02g00229 254 Pfam Ribosomal protein S2 21 116 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 MobiDBLite consensus disorder prediction 153 173 - -
Adu02g00229 254 PRINTS Ribosomal protein S2 signature 18 36 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 PRINTS Ribosomal protein S2 signature 48 57 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 PRINTS Ribosomal protein S2 signature 122 139 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 PRINTS Ribosomal protein S2 signature 139 150 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 PRINTS Ribosomal protein S2 signature 97 114 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 ProSitePatterns Ribosomal protein S2 signature 1. 18 29 IPR018130 GO:0003735|GO:0005840|GO:0006412
Adu02g00229 254 PANTHER 40S RIBOSOMAL PROTEIN SA 8 158 IPR005707 GO:0003735|GO:0006412|GO:0015935
Adu02g00229 254 TIGRFAM uS2_euk_arch: ribosomal protein uS2 14 158 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00229 Adu-Chr2 2590762 2592758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00229 5 246 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 58.163 4.07e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00229 K02998 - jre:109004976 305.449