Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00182 ATGAGTTCAGGTGTCGTTGTCATCCTTACTTTCTTAGCCTTTCTCATGGGTGTAAGAATAGGTACCCCTGCCATGACTTCAAGAGGATGTTTAGAAGCTGATTTTGAGACAATGGCTGAATTTCTGTTTAGAGCCGCGCAACTTGCAAACGTATTGCAGAGGGAGCATGGGAAAATGCAGAAGACAGTTTTGAAGGGGCTTGATAGCAGTAGGGAGGTTGTTGATCTCCGGGCTCGGGTTGAAGCTTTTGCAACTCAATTCGCAATGCCTGAATCAAATTTGGATGGAGCTTACACAGCGCTACAGGCATGGAAATCTGCAATCACTGATGACCCAAAGAAAAATCTAGGAAGATGGGTTGGTCCAAATGTGTGTTCTTACAAAGGGGTTTTTTGTGATTTTACTGAAGATGAAATGGGTGCATCTGCATCAGCATTCCCTGTAGTTGCAAGCATAGATCTCAACCATGCAAATCTCCAAGGAACCCTTATCAAAGAGTTATCTTTACTCACTGACATGTCCCTTTTCCACCTTAACAGTAACAGTTACTTCTCCGGGACAATCCCTCAAGAACTCTTCTACAAGAATCTTGATGCATTGTTTCTCAACAACAATCAATTTGAAGGTGAAATTCCTCAGAATCTTGAAAATTCTCCTGCATCAGTGATAAATTTAGCCAACAACAAGTTGAGTGGAAACATCCCAGCAAGTTTTGGATTCATGGGTTATAGAAAGACAACACCTGATGCTTGA 753 0.4197 MSSGVVVILTFLAFLMGVRIGTPAMTSRGCLEADFETMAEFLFRAAQLANVLQREHGKMQKTVLKGLDSSREVVDLRARVEAFATQFAMPESNLDGAYTALQAWKSAITDDPKKNLGRWVGPNVCSYKGVFCDFTEDEMGASASAFPVVASIDLNHANLQGTLIKELSLLTDMSLFHLNSNSYFSGTIPQELFYKNLDALFLNNNQFEGEIPQNLENSPASVINLANNKLSGNIPASFGFMGYRKTTPDA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00182 250 Gene3D Aspartate Aminotransferase, domain 1 14 90 IPR015422 GO:0003824
Adu02g00182 250 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 182 243 - -
Adu02g00182 250 SUPERFAMILY L domain-like 99 239 - -
Adu02g00182 250 SUPERFAMILY PLP-dependent transferases 17 90 IPR015424 -
Adu02g00182 250 PANTHER LRR/EXTENSIN 182 243 - -
Adu02g00182 250 PANTHER LRR/EXTENSIN 80 182 - -
Adu02g00182 250 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 80 182 - -
Adu02g00182 250 Gene3D Ribonuclease Inhibitor 97 245 IPR032675 -
Adu02g00182 250 Pfam Leucine rich repeat N-terminal domain 98 133 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00182 Adu-Chr2 2159425 2161878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00182 94 241 Trihelix Transcription Factor Family AT3G19020 41.026 6.76e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00182 - - ahf:112805894 322.783