Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00158 ATGGAGGACGAGATCCGGTGGTTGCGTAACTGCAAGCACGTGTTCCACAGGGAGTGTGTGGACCGTTGGATTGATCACGATCAGAAGACGTGTCCGCTTTGTAGGACGTCGTTTGTTCCTGATGAAATGGTTGATCAGTATAATCAACGGTTGTGGGCTGCTTCTGGTGTTAGTGAGTTCTACGTAGATTACACTTCTCTCTAA 204 0.4804 MEDEIRWLRNCKHVFHRECVDRWIDHDQKTCPLCRTSFVPDEMVDQYNQRLWAASGVSEFYVDYTSL 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00158 67 PANTHER BNACNNG20990D PROTEIN 2 65 - -
Adu02g00158 67 CDD RING-H2 7 35 - -
Adu02g00158 67 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 59 IPR013083 -
Adu02g00158 67 PANTHER RING ZINC FINGER PROTEIN-RELATED 2 65 - -
Adu02g00158 67 ProSiteProfiles Zinc finger RING-type profile. 11 35 IPR001841 -
Adu02g00158 67 Pfam Ring finger domain 6 35 IPR001841 -
Adu02g00158 67 SUPERFAMILY RING/U-box 3 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00158 Adu-Chr2 1773799 1774002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00158 2 66 C3H Transcription Factor Family AT1G63840 53.731 1.34e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00158 K16281 - gmx:100500261 130.183