Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00126 ATGCTGGAGCGGAGCCTAAAGGAATCTAGGGTTTTGTTTCACTTCAATTCGCTTCAAACTTCAAATTCCCAAATCTACGCAATAGCTCAAAGGATGGGCGAATTGAAGGATACCGAGGCTTACGAGGAAGAGCTCATCGACTACGAAGAAGAAGATGAAAAAGCCCCCGATTCTGCAAAACCTGCTGCTGAATCCGGCAAGAAGGGATATGTTGGCATCCATAGCTCAGGATTCCGAGACTTCCTGTTGAAACCTGAGCTTCTTCGAGCTATTGTCGATTCAGGATTCGAGCATCCATCCGAAGTGCAACACGAGTGCATCCCTCAAGCAATTTTAGGAATGGATGTCATTTGTCAAGCAAAATCTGGGATGGGAAAAACTGCAGTTTTTGTTCTTTCAACACTTCAGCAAATCGATCCTCTTCCTGGTCAAGTTGCAGCTCTTGTTCTTTGCCATACGAGAGAGCTAGCTTATCAGATTTGCCATGAATTTGAAAGGTTCAGCACATATCTTCCTGATATCAAAGTTGCTGTTTTCTATGGGGGTGTCAATATTAAGGTTCACAAAGAATTGCTTAAGAATGAATGTCCTCATATTGTGGTTGGAACACCTGGGAGGATTCTTGCCCTGACTAGAGATAAGGACCTTGGCTTAAAGAATGTGAGGCATTTTATTCTTGATGAGTGTGACAAGATGCTTGAATCACTTGACATGAGGAGAGATGTGCAAGAGATTTTCAAATTGACTCCCCATGAAAAGCAAGTCATGATGTTTTCTGCTACACTCAGCAAAGAGATCCGACCTGTTTGCAAGAAATTTATGCAAGATCCAATGGAAATTTATGTGGATGACGAGGCCAAGTTAACACTTCATGGTCTTGTTCAGCACTATATCAAATTGCAAGAATCGGAGAAGAATCGTAAGTTGAATGATCTTCTTGATGCTCTGGACTTCAACCAAGTTGTTATTTTTGTAAAAAGTGTTAGCAGAGCTGCAGAGTTGAACAAGTTGCTCGTGGAGTGCAACTTCCCTTCAATATGTATACATTCTGGAATGTCACAGGAAGAAAGGTTGAAACGATACAAAGGCTTCAAAGAAGGGAGGCAAAGGATTCTTGTTGCAACAGACTTAGTAGGAAGGGGTATCGACATAGAACGGGTTAACATAGTTATCAACTATGACATGCCTGATTCTGCTGACACTTACCTGCACAGGGTAGGAAGAGCTGGTAGATTTGGCACCAAGGGGCTTGCAATTACTTTTGTCTCTTCAACAGCTGACTCTGAAGTTCTTAATCAGGTGCAATCAAGGTTTGAAGTTGATATAAAGGAGCTTCCAGAACAAATTGACACCTCCACATATATGCCAAACTGA 1374 0.4199 MLERSLKESRVLFHFNSLQTSNSQIYAIAQRMGELKDTEAYEEELIDYEEEDEKAPDSAKPAAESGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPLPGQVAALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKELLKNECPHIVVGTPGRILALTRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHEKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLQESEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGRQRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSTADSEVLNQVQSRFEVDIKELPEQIDTSTYMPN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00126 457 SMART helicmild6 332 413 IPR001650 -
Adu02g00126 457 CDD SF2_C_DEAD 293 422 - -
Adu02g00126 457 CDD DEADc_DDX39 75 282 - -
Adu02g00126 457 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 107 280 IPR014001 -
Adu02g00126 457 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 308 453 IPR001650 -
Adu02g00126 457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 427 IPR027417 -
Adu02g00126 457 Gene3D - 289 457 IPR027417 -
Adu02g00126 457 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN 57 452 - -
Adu02g00126 457 SMART ultradead3 95 296 IPR014001 -
Adu02g00126 457 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 76 104 IPR014014 GO:0003724
Adu02g00126 457 Pfam Helicase conserved C-terminal domain 306 413 IPR001650 -
Adu02g00126 457 Gene3D - 72 288 IPR027417 -
Adu02g00126 457 Pfam DEAD/DEAH box helicase 101 266 IPR011545 GO:0003676|GO:0005524
Adu02g00126 457 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 57 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00126 Adu-Chr2 1396359 1400305 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00126 32 457 Eukaryotic Initiation Factors Gene Family AT5G11200 82.906 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00126 K12812 - gmx:100799082 822.002