Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00123 ATGATCATAATCAGAGCATATGTGCCTGTGGAGGAGGTCTTGCAGGGTGAGGAGATTGATAAATGGGTTGAAATATTGGATGTGCACAAAAAACCAGTACAAGGTGATTCAAAGATCCATGTGAGGCTGCAATACTTTGATATCAAGAAAGATCGATGCTGGGGTCGAGGCATTAGGAGTCCTAAGTTTCCTGGAGTTCCCTATACCTTCTTTGCACAAAGACAAGGATGCAGGGTATCTCTGTACCAAGATGCTCATGTGCCTGAAAACTTTATCCCCAAGATTCCACTTGCTGGAGGCAAGACTTATGAGCCTCACAGGTGCTGGGAGGATATTTTTGATGCAATCACAAATGCAAAACACTTGATATACATTACTGGTTGGTCTGTTTATACCGAGATTTCCTTGGTAAGGGATTCTAGGAGGCCAAAGGCCGGTGGAGATTCGACACTCGGCGAGCTTCTTAAGAAGAAGGCAAGTGAAGGTGTTAAGGTGTTGATGCTTGTTTGGGACGATAGAACATCGGTTGGTTTGTTGAAAAAAGATGGATTGATGGCTAGTCATGATGAAGAAACAGCACAGTTCTTCTCTAACACTCAAGTAAACTGTTGTTTATGCCCCCGAAATCCTGATGATGGAGGTAGCATTGTTCAGAGTTTCCAAATTTCTACCATGTTTACTCATCACCAGAAGATTGTTGTTGTGGACAGTGAGATGCCAGGTAAAGGAACACATATGCGAAGGGTTGTGAGTTTTGTTGGGGGTATTGATCTTTGTGATGGAAGATATGATACAGCATTCCACTCACTCTTCAGAACCTTAGACACAGCACACCATGATGATTTTCATCAACCTAACTTTCCTGGTGCGGATATCTCAAAAGGCGGTCCTAGGGAGCCTTGGCATGATATCCACTGCCGGCTCGAAGGGCCGGTAGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAGGCAAGGTGGAAAGGATGTACTTCTCCATATGAGAGAGCTCGAAAATTCCATTGTTCCCCCCTCCCCTGTGATGTTTCCTGAAGATCATGAGACATGGAATGTTCAGTTATTCAGATCAATTGATGGTGGTGCTGCTTTCGGTTTCCCTGATAGTCCTGAAGAGGCTGCCAAAGTAGGCCTTGTTAGTGGCAAGGATAACATCATAGACCGTAGTATTCAAGATGCTTATATCCATGCCATTCGTCGTGCCAAGAATTTCATCTATATTGAAAATCAGTACTTCCTTGGAAGCTCTTATAACTGGAAGCCTGAGGATATTAAGCCTGAAGATATTGGTGCTTTACATCTAATTCCAAGGGAGCTTTCCCTTAAGATTGTTAGTAAGATTGAAGCCGGGGAACGATTTGCTGTGTATGTTGTGGTCCCAATGTGGCCGGAAGGTGTGCCGGAGAGTTCATCAGTTCAGGCTATATTGGACTGGCAAAGAAGGACAATGGAGATGATGTACAAGGACATTACTGAGGCTCTCCAAGCCAAGGGTATTGAGGACGATCCTCGGAACTATTTGACATTCTTCTGCCTTGGTAATCGCGAGGTGAAGAAGGATGGAGAGTATCAGCCTTCTCAAAAACCAGAGCCTGGTTCGGATTATGAGAACGCCCAAAATGCGCGCCGCTTCATGATTTATGTTCATACCAAGATGATGATTGTTGATGATGAATACATAATTATCGGATCAGCCAACATCAACCAAAGATCAATGGACGGTGCGAGGGACTCCGAAATTGCCATGGGAGGTTACCAGCCTTACCACTTGGCAACCAGGCAGCCGGCGCGTGGCCAGATCCATGGTTTCCGAATGGCATTGTGGTATGAACACCTTGGCATGCTTCATGACTCATTCCTGAGGCCAGAAAGCAAAGAATGTATCAGCAGGGTGAACAAAGTTGCTGATCAGTATTGGGATCTCTTCTCTAAGGAGTCACTTGAGCATGACCTTCCCGGCCACCTGCTCCGATACCCGATCAGCGTTGCCAGTGAGGGACACATCACAACTCTTCCTGGATTCAAATGCTTCCCGGACACGAAAGCGCGAATTCTTGGCGCCAAAGCAGATTACCTGCCCCCTATCCTTACTACTTAG 2121 0.4559 MIIIRAYVPVEEVLQGEEIDKWVEILDVHKKPVQGDSKIHVRLQYFDIKKDRCWGRGIRSPKFPGVPYTFFAQRQGCRVSLYQDAHVPENFIPKIPLAGGKTYEPHRCWEDIFDAITNAKHLIYITGWSVYTEISLVRDSRRPKAGGDSTLGELLKKKASEGVKVLMLVWDDRTSVGLLKKDGLMASHDEETAQFFSNTQVNCCLCPRNPDDGGSIVQSFQISTMFTHHQKIVVVDSEMPGKGTHMRRVVSFVGGIDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFPGADISKGGPREPWHDIHCRLEGPVAWDVLFNFEQRWRRQGGKDVLLHMRELENSIVPPSPVMFPEDHETWNVQLFRSIDGGAAFGFPDSPEEAAKVGLVSGKDNIIDRSIQDAYIHAIRRAKNFIYIENQYFLGSSYNWKPEDIKPEDIGALHLIPRELSLKIVSKIEAGERFAVYVVVPMWPEGVPESSSVQAILDWQRRTMEMMYKDITEALQAKGIEDDPRNYLTFFCLGNREVKKDGEYQPSQKPEPGSDYENAQNARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLATRQPARGQIHGFRMALWYEHLGMLHDSFLRPESKECISRVNKVADQYWDLFSKESLEHDLPGHLLRYPISVASEGHITTLPGFKCFPDTKARILGAKADYLPPILTT 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00123 706 CDD PLDc_pPLDalpha_2 390 599 - -
Adu02g00123 706 Pfam Phospholipase D Active site motif 224 262 IPR001736 GO:0003824
Adu02g00123 706 Pfam Phospholipase D Active site motif 553 579 IPR001736 GO:0003824
Adu02g00123 706 PANTHER PHOSPHOLIPASE D ALPHA 1 2 706 - -
Adu02g00123 706 PIRSF PLD_plant 1 706 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Adu02g00123 706 SUPERFAMILY Phospholipase D/nuclease 50 338 - -
Adu02g00123 706 SMART pld_4 224 262 IPR001736 GO:0003824
Adu02g00123 706 SMART pld_4 552 579 IPR001736 GO:0003824
Adu02g00123 706 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 552 579 IPR001736 GO:0003824
Adu02g00123 706 Pfam Phospholipase D C terminal 625 696 IPR024632 -
Adu02g00123 706 Gene3D Endonuclease Chain A 373 595 - -
Adu02g00123 706 PANTHER PHOSPHOLIPASE D 2 706 IPR015679 -
Adu02g00123 706 Gene3D Endonuclease Chain A 98 343 - -
Adu02g00123 706 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 224 262 IPR001736 GO:0003824
Adu02g00123 706 SUPERFAMILY Phospholipase D/nuclease 348 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00123 Adu-Chr2 1382874 1385465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00123 2 706 Phospholipase D Gene Family (Wang group) AT1G52570 81.161 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00123 K01115 - gmx:100786410 1287.32