Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00109 ATGGCTCTTTGGTTATGCTGCGGAAATGGCAAGAAACGAGGGAAAGAACACGCGACGTGGCGTGTGTTTTCTTTGAAGGAATTACAGTCTGCTACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGGGGCTTTGGCAGTGTGTATTGGGGCCAACTTTGGGACGGATCGCAAATCGCAGTCAAGAGATTGAAAGTTTGGAGCAACAAAGCTGACATGGAATTTGCCGTTGAAGTTGAAATATTGGCAAGAGTTCGGCACAGGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGGCAGGAACGGTTGATTGTATATGATTATATGCCGAATCTGAGCTTGCTCTCTCATCTACATGGATCGCACTCGTCAGAATGCCTTCTTGATTGGAAACGGCGGATGGATATTGCAATTGGATCTGCTGAGGGGATTGTATATCTTCACCACCAAGCAACACCGCATATCATCCACAGGGATATCAAGGCAAGCAACGTTTTGCTAGACTCGGATTTCCAGGCCCGGGTTGCTGATTTTGGTTTTGCTAAGTTGATACCTGATGGTGCAACGCACGTGACTACAAAAGTTAAGGGTACCCTCGGATACCTCGCCCCAGAATACGCCATGTTAGGCAAAGCAAATGAGAGTTGTGATGTCTATAGTTTTGGTATTCTCCTTCTAGAACTTGCTAGCGGCAAGAAACCAATTGAAAAGCTTAGTTCGGCAGTTAAGCGGCCAATAGTTGATTGGGCACTGCCATTGGTATGCGAAAGGAAATTTAGTGAACTCGCTGATCCACGACTAAACGGTGAGTATGTGGAGGAAGAGCTTAAAAGGGTTGTTTTTACTGCGCTGATATGCGCTCAAAATCAACCTGAGAAGAGACCTACCATGCTTGATGTCGTTGAACTGCTAAAGGGAGAATCTAAAGACAAAATTTCTCAGATAGAGAATAGTGAATTATTCAAAAGCCATCCAGCCGTAGAAAACAGTGATCCGAAATCTGGGACCGAAGATGACGGTTCAGACTTAATCTTGGAGGTAAAAGAATCAAAACATGACTTGAAAGAGAATACCGGTGAATGA 1089 0.4408 MALWLCCGNGKKRGKEHATWRVFSLKELQSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHRNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGSHSSECLLDWKRRMDIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPIEKLSSAVKRPIVDWALPLVCERKFSELADPRLNGEYVEEELKRVVFTALICAQNQPEKRPTMLDVVELLKGESKDKISQIENSELFKSHPAVENSDPKSGTEDDGSDLILEVKESKHDLKENTGE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00109 362 SMART serkin_6 35 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00109 362 Gene3D Transferase(Phosphotransferase) domain 1 111 324 - -
Adu02g00109 362 PANTHER OS01G0253100 PROTEIN 4 338 IPR045271 GO:0004714|GO:0006468
Adu02g00109 362 MobiDBLite consensus disorder prediction 333 362 - -
Adu02g00109 362 CDD STKc_IRAK 41 308 - -
Adu02g00109 362 ProSiteProfiles Protein kinase domain profile. 35 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00109 362 MobiDBLite consensus disorder prediction 317 362 - -
Adu02g00109 362 SUPERFAMILY Protein kinase-like (PK-like) 18 306 IPR011009 -
Adu02g00109 362 PANTHER - 4 338 - -
Adu02g00109 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Adu02g00109 362 Pfam Protein tyrosine and serine/threonine kinase 37 306 IPR001245 GO:0004672|GO:0006468
Adu02g00109 362 Gene3D Phosphorylase Kinase; domain 1 9 110 - -
Adu02g00109 362 ProSitePatterns Protein kinases ATP-binding region signature. 41 63 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00109 Adu-Chr2 1233343 1236719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00109 23 309 Trihelix Transcription Factor Family AT1G70460 50.859 5.62e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Adu02g00109 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00109 - - gmx:100788153 598.971