Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Adu02g00090 | ATGATTCATCAAACTATAACAACAAACCATGGTTTAGCTTACAAAATCAGCATAGTTCTCACCACTTTGATGGTAGCTCTTCATGCAGCAACTCTATCACTCATGATTTTCAATCATGAGACTCAATGCTCTTCAAAATTCAAGGCTATTGCATCAGAAACAATTCAAGTTCTATCATGGGGTGCGAGTCTAATTGCAATTTTCAAGGTATCAAGAACAAGTTCTTATTTTTCTTGGATTCTCAGAGCTTGGTGGATTTGTAGTTTCATTTTGTGCATTGTTGGAACATCACTTCATACAATATTGAGTGTTAGCCAAAAGGGTCAAATTGGTTTAAGAGAATATGCAGATTTCATTGGTTTGGTTACTTCAACATTCTTATTGATTGTTTCAATTAGAGGGAAGAGTGACATTGTGTTAGTTCAAAAAAGTGAGGTAACTGAACCACTTCTGAGTTCAAAACCTGGTAAAACTTCAGAATTTCCAAAGGAATCTCCATATGGAAAGGCTACTTTGATGCAACTCATCAACTTCTCTTGGCTCAATCCATTGTTTGAAGAAGGTTACAAGAAGCCTCTTGAGCAAAGTGACATTCCTAATGTTGATATCAAGGACTCGGCCGAGTTTCTAACCTCGGCCTTCGACGAGAGCCTTAGGCAGGTAAAGGAGAAAGATGGAACTACAAACCCCTCTATTTACAAGGCAATCTATCACTTCACCAGGAAGAAAGCAGCAATCAATGCGCTTTTCGCCATAATATGCGCTTCGGCTTCATATGTTGGTCCATACTTGATCACTGACTTTGTTGATTTCTTGGGGGACAAGGAAAAGCAGGGGTTGAAAACAGGGTATCTTCTTTCACTAGCATTCTTGTGTGCTAAGATGGTTGAGACAATAACTCAGAGGCAATGGATTTTCGGCGCAAGGCAATTAGGCCTTCGCCTTAGATCTGCATTGATATCTCATATATATAAGAAGGGTCTGCATCTTTCGAATAGATCGCGACAAAGTCACACAGGCGGCGAGATAATGAACTATATGAGTGTTGATGTGCAGAGAATCACAGATTTCATTTGGTATGTTAATGTGATTTGGATGCTTCCTATACAAATTTCTTTAGCAGTGTTCATTTTGCATACAAATCTTGGATTAGGCTCTATGGCCGCGCTAGCCGCGACTCTAGCAGTGATGACTCTGAACATACCTCTTACCAAAATACAGAAAAGATACCAAGCAAAGATCATGGCAGCCAAAGATGAAAGAATGAAAGCAACTTCAGAAGTTCTGAGAAACATGAAAACTTTGAAGCTTCAAGCATGGGATAGTGAATTTCTTCAAAGGCTAGAATCATTGAGGAAAGTGGAGTATAATTGGTTACTGAAATCACTACAACAAGCAGCACTTTCTGCTTTTATCTTCTGGGGATCACCTACATTCATATCTGTGATAACCTTTTGGGCTTGTATGCTAATGGGAATCGAGCTAACGGCCGGAAGAGTCTTATCCGCATTCGCCACATTTAGAATGTTACAGGATCCTATTTTCAGCCTACCTGATTTACTCAATGTCATGGCTCAAGGGAAAGTTTCGGTTGATAGGATCGCTTCATACCTTAGGGAGGAAGAAATCCAGCATGATGTCATTGAAAATGTATCAAGGGACAAAACAGAATTTGATGTAGTCATTGATAAAGGGAGATTCAGCTGGGATCCAGAGTCTAGAACTCCATCTATTGATCAAATAGAGTTGAAAGTTAAAAGAGGAATGAAGGTGGCGATTTGTGGATCGGTTGGTTCTGGAAAATCAAGCCTGCTGTCTGGTATTTTGGGAGAGATATATAAGCAATCCGGGAAAGTGAAGATCAGTGGAACCAAAGCTTATGTTCCACAGTCTCCATGGATTCTTACAGGGAATATTAGAGACAATATCACATTTGGAAAAGAGTATGATCCTGAAAAGTATGAGAAAACTGTCCAAGCTTGTGCATTGAAGAAGGACTTTGAGCTATTCTCTTGTGGTGATCTCACTGAGATTGGAGAAAGAGGGATCAACATGAGTGGTGGACAAAAGCAGAGGATTCAGATAGCGCGAGCCGTTTACCAAGATGCTGATATATATCTTCTTGATGACCCTTTTAGCGCCGTCGATGCACATACCGGAACACACCTATTTAAGGAGTGTCTTATGGGGATTCTTAAAGAGAAAACCATACTTTTTGTTACACACCAAGTTGAATTTCTTCCAGCAGCAGATCTCATCCTGGTGATGCAAAATGGAAAAATTACACAAGCTGGAAAATTTGAAGAGCTTCTAAAGCAAAACATAGGATTTGAAGTCTTAGTTGGTGCTCATAGTAAAGCTCTCGAGTCAATTCTCACTGTCGAAAACTCAAGCAGAACAGCTCAAAATCCCATAGCTGAAGCAGAATCCAACTCAAATGTGAAACTCATGCACAAAGAACAGCATGACACAGTGGAAGATAATCCACCAGAGAGGAAAGGAAATGAAGGAAAATTGGTGCAAGATGAAGAAAGAGAAACAGGAAGCATATCAAAAGAAGTATACTGGACTTATTTGACAACTGCAAAAGGAGGAGCATTGGTTCCGGTTATAATCTTAGCACAATCTTCATTCCAAATACTTCAGATTGCAAGTAACTATTGGATGGCTTGGGTTTGTCCTACAAGTAGTGATGCTAAGCCTATATTTGACATGAATTTCATACTTCTTATTTACATGGCTCTTTCTGTTTCCGGCGCGCTATGTGTTCTGGTGCGAGCCTTGTTGGTTGCATACACCGGCCTTTGGACAGCACAGACATTCTTCACAAGCATGCTGCATAGTGTGCTTAGAGCTCCAATGTCATTCTTTGATTCAACACCAACTGGAAGAATCTTGAACAGGGTCTCTACAGATCAAAGTATTCTAGATTTGGAGATGGCAACCAAATTAGGATGGTGTGCTTTCTCTGTAATACAAATTCTGGGAACTATTGCAGTGATGTCTCAGGTGGCATGGCAAGTTTTCGCCATTTTCATTCCGGTAACTGCAGTCTGCATATGGTATCAAGTATGTCATCCTTTCTCTCCTTCTTCATGTTCCTATGTCATCATCATTACTAGTTAA | 3126 | 0.4002 | MIHQTITTNHGLAYKISIVLTTLMVALHAATLSLMIFNHETQCSSKFKAIASETIQVLSWGASLIAIFKVSRTSSYFSWILRAWWICSFILCIVGTSLHTILSVSQKGQIGLREYADFIGLVTSTFLLIVSIRGKSDIVLVQKSEVTEPLLSSKPGKTSEFPKESPYGKATLMQLINFSWLNPLFEEGYKKPLEQSDIPNVDIKDSAEFLTSAFDESLRQVKEKDGTTNPSIYKAIYHFTRKKAAINALFAIICASASYVGPYLITDFVDFLGDKEKQGLKTGYLLSLAFLCAKMVETITQRQWIFGARQLGLRLRSALISHIYKKGLHLSNRSRQSHTGGEIMNYMSVDVQRITDFIWYVNVIWMLPIQISLAVFILHTNLGLGSMAALAATLAVMTLNIPLTKIQKRYQAKIMAAKDERMKATSEVLRNMKTLKLQAWDSEFLQRLESLRKVEYNWLLKSLQQAALSAFIFWGSPTFISVITFWACMLMGIELTAGRVLSAFATFRMLQDPIFSLPDLLNVMAQGKVSVDRIASYLREEEIQHDVIENVSRDKTEFDVVIDKGRFSWDPESRTPSIDQIELKVKRGMKVAICGSVGSGKSSLLSGILGEIYKQSGKVKISGTKAYVPQSPWILTGNIRDNITFGKEYDPEKYEKTVQACALKKDFELFSCGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTHLFKECLMGILKEKTILFVTHQVEFLPAADLILVMQNGKITQAGKFEELLKQNIGFEVLVGAHSKALESILTVENSSRTAQNPIAEAESNSNVKLMHKEQHDTVEDNPPERKGNEGKLVQDEERETGSISKEVYWTYLTTAKGGALVPVIILAQSSFQILQIASNYWMAWVCPTSSDAKPIFDMNFILLIYMALSVSGALCVLVRALLVAYTGLWTAQTFFTSMLHSVLRAPMSFFDSTPTGRILNRVSTDQSILDLEMATKLGWCAFSVIQILGTIAVMSQVAWQVFAIFIPVTAVCIWYQVCHPFSPSSCSYVIIITS | 1041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Adu02g00090 | 1041 | Coils | Coil | 407 | 427 | - | - | |
| Adu02g00090 | 1041 | ProSitePatterns | ABC transporters family signature. | 685 | 699 | IPR017871 | GO:0005524 | |
| Adu02g00090 | 1041 | Gene3D | ABC transporter type 1, transmembrane domain | 217 | 546 | IPR036640 | GO:0005524|GO:0016021 | |
| Adu02g00090 | 1041 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 870 | 1024 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
| Adu02g00090 | 1041 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 51 | 1025 | - | - | |
| Adu02g00090 | 1041 | CDD | ABC_6TM_ABCC_D1 | 246 | 534 | IPR044746 | GO:0140359 | |
| Adu02g00090 | 1041 | SUPERFAMILY | ABC transporter transmembrane region | 870 | 1024 | IPR036640 | GO:0005524|GO:0016021 | |
| Adu02g00090 | 1041 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 555 | 776 | IPR027417 | - | |
| Adu02g00090 | 1041 | Pfam | ABC transporter transmembrane region | 879 | 1022 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
| Adu02g00090 | 1041 | Pfam | ABC transporter transmembrane region | 246 | 509 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
| Adu02g00090 | 1041 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 245 | 526 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
| Adu02g00090 | 1041 | Pfam | ABC transporter | 579 | 712 | IPR003439 | GO:0005524 | |
| Adu02g00090 | 1041 | CDD | ABCC_MRP_domain1 | 560 | 760 | - | - | |
| Adu02g00090 | 1041 | SUPERFAMILY | ABC transporter transmembrane region | 241 | 542 | IPR036640 | GO:0005524|GO:0016021 | |
| Adu02g00090 | 1041 | PANTHER | - | 51 | 1025 | - | - | |
| Adu02g00090 | 1041 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 560 | 783 | IPR003439 | GO:0005524 | |
| Adu02g00090 | 1041 | MobiDBLite | consensus disorder prediction | 820 | 845 | - | - | |
| Adu02g00090 | 1041 | SMART | AAA_5 | 587 | 760 | IPR003593 | - | |
| Adu02g00090 | 1041 | Gene3D | - | 555 | 786 | IPR027417 | - | |
| Adu02g00090 | 1041 | Gene3D | ABC transporter type 1, transmembrane domain | 800 | 1026 | IPR036640 | GO:0005524|GO:0016021 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Adu02g00090 | Adu-Chr2 | 1010912 | 1014624 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Adu02g00090 | 548 | 813 | Calmodulin-binding Proteins | AT2G36910 | 28.571 | 1.73e-23 | 105 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Adu02g00090 | - | - | gmx:100809749 | 1647.1 |