Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00088 ATGAAGCTCTCCTTCTCGATCCCCTCCAAGTCCTCTTCCTCCTCCAATCCCATCAAACTCGATCACTCCTCCAAAAACGACGCCCCACCCTCCAAGCACTTCGTCACCGAATTCGACCCTTCCAAACCGCCAACTGAACAAACCGCCACCGTTATACCCCCGATCCAGAACGAATGGCGCCCCACCAAGAAGATGAAGAACCTCGAGCTTCCCATCACCGACCCCAACGCTGACCATCAATCCCTCGAATTCGAGCACGATTCCAATGCCGCGGATGCAGAACCCGGCACCGACATGTCCTACGGTCTCAACCTGCGCCAAGCCGCCGAGAAAAATGGAAAAACCGGTGAACTCGCTGATGATGAGGATGATAGGGTTCCGCGGCAACGGCCGGAGGTGGCGTTGCTGCAGAAGTTTAAGGACGATTTGAAGCGGCTTCCTGATCACCAGGGTTTCGAGGAGTTTAATGATGTCCCTGTTGAGGGTTTCGGCAAGGCCTTGCTGGCCGGATATGGGTGGTCAGAAGGAATGGGAATAGGGCGGAATGCCAAGGAGGACGTCAAGATTGTGGAGTACAAGAGGAGGACTGCCAAGGAAGGGTTAGGATTTGTTGGCAATGATCGCGGTTCCGTTCAGAGCCAGAAGAAGGAGGAGAAGAAGAAAAGCAGGGAAGACAGTGGGAGAAATGATGCAGATTTTGTTAGTGAGAAGAAGATTGTGAGGATTATTGGGGGGAAAGATGCTGGATTGAAGGGTATCGTTGTGAGGAGAATTGGGGAGGATTGGATTGTTTTGAAGGTTTCAAGGAGTGGGGAGGAAGTGGAGGCTAGAGTGAGTGTGGATGATGTTGCTGAACTGGGATCTGCTGAGGAAGAGAGGTGCTTGAGGAAATTGAAGGAACTGAGGATTCGGCACAAGGGTGAAGATGATTGTAACAGGGACAAGGCTTCAAGGCATAAGCGTGAGAGAGATGAGAAGACAACTCGAGTGAAAGCTAATGGGGGTGATCATAGGAAGGAAGATCAGCAGCGAGGAAAGAAACGGATTTCTTGGCTCACAAGTCACATTCGAGTACGGGTTATTAGCCAGAACATTAAAGGAGGGCGGTTGTATTTGAAAAAGGCACAGGTTTTGGATGTTGTTGGGCCTTTGACTTGTGATATATCTATGGATGAGAGCAAAGAGATTGTTCAAGGAGTGTCCCAAGATATGCTGGAGACCGCGCTTCCTCGACGTGGGGGACCAGTTCTTGTGCTATCTGGTAAATATAAGGGTGCCTTTGGGAGCCTGGTTGAGAGGGATTTGGATCGGGAAGTTGGTGTTGTTCAGGATGCTGATACTCATGAGCTGCTCAATGTGAAGCTTGAACAGATTGCAGAAATCAAGCACACATACATCATAGAGGATCCTTTTGATGATCTTCATCAGCTAGCTGAGTTCATTCTTGAAGCTTCACCAGGAGGAAAACCTAAAGATGAAATGGTCCCTTATGACAAAAACAGCTCTTCTATTGTCAAAATGATTCCATTTGGCAAAAAGATGGTACATGGACACTTCATGAATAATTTATGGAGATTTGATTCATCTTCATATCACCAAGTTTGTGGACTTATTAATTCCATTGGACATGAGTATGTGGTTGCAACTGAATAG 1653 0.4809 MKLSFSIPSKSSSSSNPIKLDHSSKNDAPPSKHFVTEFDPSKPPTEQTATVIPPIQNEWRPTKKMKNLELPITDPNADHQSLEFEHDSNAADAEPGTDMSYGLNLRQAAEKNGKTGELADDEDDRVPRQRPEVALLQKFKDDLKRLPDHQGFEEFNDVPVEGFGKALLAGYGWSEGMGIGRNAKEDVKIVEYKRRTAKEGLGFVGNDRGSVQSQKKEEKKKSREDSGRNDADFVSEKKIVRIIGGKDAGLKGIVVRRIGEDWIVLKVSRSGEEVEARVSVDDVAELGSAEEERCLRKLKELRIRHKGEDDCNRDKASRHKRERDEKTTRVKANGGDHRKEDQQRGKKRISWLTSHIRVRVISQNIKGGRLYLKKAQVLDVVGPLTCDISMDESKEIVQGVSQDMLETALPRRGGPVLVLSGKYKGAFGSLVERDLDREVGVVQDADTHELLNVKLEQIAEIKHTYIIEDPFDDLHQLAEFILEASPGGKPKDEMVPYDKNSSSIVKMIPFGKKMVHGHFMNNLWRFDSSSYHQVCGLINSIGHEYVVATE 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00088 550 PANTHER G PATCH AND KOW-CONTAINING 1 461 IPR045166 GO:0000398
Adu02g00088 550 Pfam G-patch domain 147 203 IPR026822 -
Adu02g00088 550 MobiDBLite consensus disorder prediction 41 55 - -
Adu02g00088 550 Gene3D - 355 409 - -
Adu02g00088 550 SMART kow_9 409 436 IPR005824 -
Adu02g00088 550 SMART kow_9 233 260 IPR005824 -
Adu02g00088 550 MobiDBLite consensus disorder prediction 113 128 - -
Adu02g00088 550 MobiDBLite consensus disorder prediction 307 346 - -
Adu02g00088 550 MobiDBLite consensus disorder prediction 203 229 - -
Adu02g00088 550 MobiDBLite consensus disorder prediction 1 128 - -
Adu02g00088 550 MobiDBLite consensus disorder prediction 211 229 - -
Adu02g00088 550 ProSiteProfiles G-patch domain profile. 160 206 IPR000467 GO:0003676
Adu02g00088 550 MobiDBLite consensus disorder prediction 1 22 - -
Adu02g00088 550 SMART G-patch_5 158 204 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00088 Adu-Chr2 987569 990411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00088 351 443 C2H2 Transcription Factor Family AT1G55460 33.333 8.93e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00088 K13101 - gmx:100784983 479.944