Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00087 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGCGCCACTGGTGGCAAGAAGAAGGTTTGGAGGAAGAAGAGAAAGTATGAGCTTGGACGCCAACCAGCCAACACTAAGCTATCGAGCAATAAGACGGTCAGGCGGATTCGCGTTAGAGGTGGCAATGTGAAGTGGAGGGCATTGAGGTTGGATACAGGAAACTATTCGTGGGGAAGTGAAGCTGTGACGCGCAAGACTCGTATTCTTGATGTTGTTTACAATGCCTCCAACAACGAGCTCGTGAGAACTCAGACCCTTGTCAAGAGTGCCATTGTTCAGGTTGATGCTGCTCCATTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGCAGGAAGAAGAAAACAGCAGCTGCCAAGAAGGATGCTGCCGAGGAAGGTGAGACCCCTGCTGAGGAAGCCAAGAAAAGCAACCATGTGCAAAGAAAAATCGAGAAACGCCAGAAAGATCGCAAACTTGATCCCCATATTGAAGAGCAGTTTGGTGGTGGGAGATTGCTGGCTTGCATTGCTTCTCGACCTGGTCAATGTGGCAGGGCTGACGGCTACATTTTGGAAGAGGTTCATCGTCACTGTTGGTCCATTCGAAGCGGGAGAAGACGACCAGAGTACGCCGAATCGAGTAGCAAGGAGGGGCTTTTACCAGTACTTTGGTATTCGACATCGAGGTGGTCACTCCCTTTGAAGAATTACACAGGGATGGCCACCATCCACATAACTTTGTCAATTCATCATAGAGGAAGGTTTGAGAGAGAGCCAGTTGGTAAGGTTAGCTACATTGGTGGAGAAGTGATGGAGATAGAGAGGGTAAACGTTGATACCGTCAATGGTTTTTTCATCTCTGACTTGCTGAAGGACATTGGTTATACGTCCATTTCTGAGTTTTACTGGCTAGAACCTGGGAAGGAGCTTCATGATGGGTTGAGACTGCTAAGGATTGATATGGATGTAGTTAGAATGTATGAGGCAGCCATGAAGAATGCAAATAGAATTAATCTGTACACAGAGCATCCTGTGGATCAGCCTGTTGTAGTGGAGGTTAAGGAATTGACTCCATCAAAGGGGAGAAGAAAGGTCTGTGTTAAAAGGGTACCGACTCCAAAGAAGACTCCAAGAAGAAGATTAGCAGTAGTGGAAGATGATGATGATGCTGAGATAGTTGGTAATGTCCAAGTTGAAAAGCAGGCCCAAAAAAGTGCTGGCCCACAGCCCATGGTACAGGCCCATCAAGAGAACAGCCCAGCTCCTGTAGCAACTCAGGAACCAAATAACATTTCTGAACCTCCTCCAACACCTGTCCAGCCGGATGAACCACCATCAACTCATTCCCAACCTTCACAGCCACCTCTTGAGGTAGAGCAGCAACCATCTGAAACTCATGGGACAGACCCAGTCCCTCCCCATGATGCCAATGTATCTGAAGCTTCACAGCAACCTTGGCAGTCTGATGATACAGACCAATTCATTCCCTCTCAGGCCAATGTATCTGACCATATTGCACCAGAGCAGCTCACCCAATACATCCCACATCCTTACACAAATTCACTTTCACAAGAAATCCCTGAGTCAGCCCCACCTTCTGACTCCAACAGGACTCCCCAGAACAATGAAACCAATCCTTCAGATGAGGCTGAGGGTGAGAGAAAAAAGAACAGGAGAAGATCAACAAAGAGGCCCCCTCCTACAGGACAGTCATTCATACCTAATCCTGATCCAGACAAGCCTCCAACCTTCTATGTCCCAGTTGATCAGGAAGATTTTTCTGATGACAACGCTGGGTATCATTGCTATGAGTCTGAGGACTTGCATAGCATACCTAGTGATGAAGATTCTGATGAGACCACAGCCTTTCCTCAGAGTAATGCCGATGCCCCTGTTAGCCAGGGGTTAATTCCTGCAGTCCAAGAAATGTACCCAAATGCCAACCACAGtgggaggttagccccaacccaacagagcagattAGAAAGAGAAAAGAGAGAGAGCAACAAATGGAGACCCCTTCCAACCGGAGATGACGCGGGAAATGTTTATGAAGTCCAATGTCTTCCCATGAAGGTCAGTGTGGACTTGGGCAAAGGTACATGTAGTTGTAGACTGTGGCAGTTGACTGGGCTACCTTGTAGACATGCATGTGCTGCTCTAGCTTACCAGAATAGAAGACCTGAAGAGTATGCACATAACTGGCTAACTATGGGTGCTTATAATGCTGCATATCAGACTTCAATGCGCCCAGTTCCAAGCCAAGAGTTCTGGGAGCATATCGACACCCTACCAATTCTGCCACCCAGGTACAAGAAGCCAATCGGAAGACCTTCAATGAAAAGAGACAAAAGAAATGATGCCCCTAAGGATAAGAGTGATCCTCATAGAACTAAGAGGAGGATTGCCACCATCGTGTGCAAATACTGCCTCCAGCCTGGTCATAACAAGCGAAGCTGTAAGAAGAGAAAGGAAGCAATGGGTGAAGGGAGTGCTGCCCCACAAGTCCCTGCAAGTGATGAGGATGAAGATATGCTGGCTGAAAGGTACTATGAGGAGACATTAGAAGCTGCTGAGGCTGAAGCAGTAGCAACTGAGGTGGAAAATGGTTCAACAACAGCCCAGACTTCACAGCCTCCACCTCCGATGCCACAACCAGCAGCCACACAACCCCATGATGCAACAACCACTGGAGCAGCCAAGAAACAACATAAAAGGAGAAGTGTCAAGCGACCACCCCCTACTGCACATACCACACAAGCTTCTGCACCATCTCCGAAGAATCCAACCACAACCCCTTCCACACACAACTCTCAAACAACCCCAAATCCACTGCAGGGTGCTAGTGCAGGGACAACCACAAGGTTCGTGCAGTTCATGCCTACAATGGATGTGGACGGTATTTCTAGAACTAGAGGCATACATGTTAGAGGCAGGGGTGAAGGAAGAGGTCGAGGCAGGAGAGGTGCATCAAGCGGAGCAAAAAATGGAATTTCCAGCGGGAGCAGTAACTCAACACCAATGTCATAG 3048 0.4744 MGISRDSMHKRRATGGKKKVWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTAAAKKDAAEEGETPAEEAKKSNHVQRKIEKRQKDRKLDPHIEEQFGGGRLLACIASRPGQCGRADGYILEEVHRHCWSIRSGRRRPEYAESSSKEGLLPVLWYSTSRWSLPLKNYTGMATIHITLSIHHRGRFEREPVGKVSYIGGEVMEIERVNVDTVNGFFISDLLKDIGYTSISEFYWLEPGKELHDGLRLLRIDMDVVRMYEAAMKNANRINLYTEHPVDQPVVVEVKELTPSKGRRKVCVKRVPTPKKTPRRRLAVVEDDDDAEIVGNVQVEKQAQKSAGPQPMVQAHQENSPAPVATQEPNNISEPPPTPVQPDEPPSTHSQPSQPPLEVEQQPSETHGTDPVPPHDANVSEASQQPWQSDDTDQFIPSQANVSDHIAPEQLTQYIPHPYTNSLSQEIPESAPPSDSNRTPQNNETNPSDEAEGERKKNRRRSTKRPPPTGQSFIPNPDPDKPPTFYVPVDQEDFSDDNAGYHCYESEDLHSIPSDEDSDETTAFPQSNADAPVSQGLIPAVQEMYPNANHSGRLAPTQQSRLEREKRESNKWRPLPTGDDAGNVYEVQCLPMKVSVDLGKGTCSCRLWQLTGLPCRHACAALAYQNRRPEEYAHNWLTMGAYNAAYQTSMRPVPSQEFWEHIDTLPILPPRYKKPIGRPSMKRDKRNDAPKDKSDPHRTKRRIATIVCKYCLQPGHNKRSCKKRKEAMGEGSAAPQVPASDEDEDMLAERYYEETLEAAEAEAVATEVENGSTTAQTSQPPPPMPQPAATQPHDATTTGAAKKQHKRRSVKRPPPTAHTTQASAPSPKNPTTTPSTHNSQTTPNPLQGASAGTTTRFVQFMPTMDVDGISRTRGIHVRGRGEGRGRGRRGASSGAKNGISSGSSNSTPMS 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00087 1015 MobiDBLite consensus disorder prediction 651 682 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 786 804 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 435 457 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 919 955 - -
Adu02g00087 1015 Pfam SWIM zinc finger 690 729 IPR007527 GO:0008270
Adu02g00087 1015 MobiDBLite consensus disorder prediction 967 1015 - -
Adu02g00087 1015 TIGRFAM eS8: ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Adu02g00087 1015 MobiDBLite consensus disorder prediction 458 473 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 1 22 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 664 679 - -
Adu02g00087 1015 ProSiteProfiles Zinc finger SWIM-type profile. 697 731 IPR007527 GO:0008270
Adu02g00087 1015 Gene3D Ribosomal protein S8e, subdomain 108 176 IPR042563 -
Adu02g00087 1015 PANTHER 40S RIBOSOMAL PROTEIN S8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Adu02g00087 1015 Gene3D - 25 204 - -
Adu02g00087 1015 PANTHER 40S RIBOSOMAL PROTEIN S8 1 199 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 976 994 - -
Adu02g00087 1015 Pfam Ribosomal protein S8e 5 197 IPR022309 -
Adu02g00087 1015 CDD Ribosomal_S8e_like 5 197 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 407 434 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 483 552 - -
Adu02g00087 1015 SMART 26again6 706 733 IPR006564 GO:0008270
Adu02g00087 1015 MobiDBLite consensus disorder prediction 999 1015 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 133 163 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 775 804 - -
Adu02g00087 1015 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Adu02g00087 1015 MobiDBLite consensus disorder prediction 865 955 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 575 589 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 821 849 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 623 637 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 407 637 - -
Adu02g00087 1015 MobiDBLite consensus disorder prediction 600 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00087 Adu-Chr2 978724 985626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00087 1 198 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.343 1.08e-112 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00087 K02995 - aip:107630251 494.967