Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00058 ATGGGAGGTTGCTGTTGTTCTGCCAGAAAACCTCATCTTCACGGAACGCCGGTTTATTACTATTGTCCGCCAGCTTTGGAAGAGCGCGAGTCTCTAACCTCTAACGACGGTAATGGGACAGCTGCTTCACTCACCACCGGACTGCTCATCGGCTTGAACTTGGAATCAACCATACCAGATACTTACCAGTCGCCTCCTGCGCCTCTACCGTATGATACTGTCCTGAGAGGTCCTGCATCAACAGATTCTGAGTCAGGTAGAGAAACCATTAGTGGTAGTAGTTTCGAAACTTTAGTTACGTGTGAAGATCTTGAAGAATCAGATTGTAAAGCTCAACCTAAATCGGCACCCTTATCTCCAAGGAAGCTGGAACCTTTAAAATCAAATGAATCTCATGCATTGGTGACAGAAGAAGAGGATGTATGTCCAATTTGTCTAGAAGAATATGATGCTGAGAATCCCAAAACACTGACGAAATGCGACCACCACTTTCACCTGTCATGCATTCTCGAGTGGATGGAAAGAAGCGACTCGTGTCCCATATGTGATCAGGAGATGATCTTTGACCAGCCACTGGATTAG 582 0.4588 MGGCCCSARKPHLHGTPVYYYCPPALEERESLTSNDGNGTAASLTTGLLIGLNLESTIPDTYQSPPAPLPYDTVLRGPASTDSESGRETISGSSFETLVTCEDLEESDCKAQPKSAPLSPRKLEPLKSNESHALVTEEEDVCPICLEEYDAENPKTLTKCDHHFHLSCILEWMERSDSCPICDQEMIFDQPLD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00058 193 SMART ring_2 142 182 IPR001841 -
Adu02g00058 193 Pfam Ring finger domain 141 182 IPR001841 -
Adu02g00058 193 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 189 IPR013083 -
Adu02g00058 193 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED 1 192 - -
Adu02g00058 193 SUPERFAMILY RING/U-box 133 189 - -
Adu02g00058 193 MobiDBLite consensus disorder prediction 71 90 - -
Adu02g00058 193 ProSiteProfiles Zinc finger RING-type profile. 142 183 IPR001841 -
Adu02g00058 193 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 192 - -
Adu02g00058 193 MobiDBLite consensus disorder prediction 108 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00058 Adu-Chr2 684127 686850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00058 1 193 C3H Transcription Factor Family AT4G00335 59.067 1.27e-76 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00058 - - adu:107472508 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu04g02468 04 110119250 110123217 Adu02g00058 02 684127 686850 PCT