Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00056 ATGGATTCTTGTGATAAAAGGGATGGTTTTCAGGACATGGGGTTGGTGAAATTTGGATCTGGTAGTGTGAATTTTTCGAAAGCTAAGTCTAGGAGCCTTTGTGAGAGTAAATGTTTGGGATCTTGTGATTGTGTTGGGTTAACTTTCAGTGAAGGGAGTGGTTTGTGTAAGAACTTTTATGGGTCAGTGTTTGATTTTCAGAATGTGAGTTCTGTTGGTCTTGGTGTTGGTGATGGTGGTGGTGCGTTGTATGTGAGGGTGCCAAGAGATGGGAATGAGAAGGGTTTGGATAGTAAGGTTTTGATTGTTGTTGTCCTTGTTGGGTCGGTGGCAGTTTTGGGTGTTGTGGTGGTGACTTTGTTGGTGTTGGTGAAGAAAAAGAGGAAGAAGGAGTTGGAGGAGGAAGATAGATTTATTCAAATGTTGAATTTGAGGATGTTTTCTTACAAGGAGCTTCAATTGGCAACAAGGGGTTTttcggagaaagttgggcatggtggatttgggactgtatttcaaggtgaattgagtgattcaactcttgttgctgtgaagaggttggagaggccagggagtggggagaaagagttcagggccgaggtttcggatttcggtttggcaaagctcatggggagggatttcagtagggtgctggcaaccatgaggggtacttgggggtatgttgctccggagtggatttccggggtggcaattactgccaaggctgatgtttatagttatggaatgacattgcttgaactaattggtggTCGCCGAAACATTGAGACACTGCCATCTGCTGGTGGTTGTGACAGAGGCAAAGAGAGTGGTTGTGAGATGGGAGAGAGATGGTTCTTTCCTCCTTGGGCGGCACGGCAGATAATTGACGGCAATGTGGCTTCCGTGATCGATAAGAAACTTGGAGATGTATATAACATTGAGGAGGCTAGAAGGGTTAGTTTGGTAGCAGTTTGGTGCATTCAAGATGATGAAGCTATTAGGCCTACAATGGATATGGTGGTGAAAATGTTGGAAGGGTTAGTGGAAATTAGGGATCCTCCATTGCCGAATTTGCTACAAGCATTGGTTACCGGCGAGTCCTTTCAAGGCGTCAAGTCTGATTCCGGCAATGAGATTTCCACCGGCGGAGGCTTATCCGGCGGCAACTTGGAAGTGTCAATTGCTGATTCAGAATCATATGTTGGAGATGCATTTCCCTCCCCAATGGATGTGAATGTCAATGTTGATGTTAGATAA 1257 0.3389 MDSCDKRDGFQDMGLVKFGSGSVNFSKAKSRSLCESKCLGSCDCVGLTFSEGSGLCKNFYGSVFDFQNVSSVGLGVGDGGGALYVRVPRDGNEKGLDSKVLIVVVLVGSVAVLGVVVVTLLVLVKKKRKKELEEEDRFIQMLNLRMFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTLVAVKRLERPGSGEKEFRAEVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITAKADVYSYGMTLLELIGGRRNIETLPSAGGCDRGKESGCEMGERWFFPPWAARQIIDGNVASVIDKKLGDVYNIEEARRVSLVAVWCIQDDEAIRPTMDMVVKMLEGLVEIRDPPLPNLLQALVTGESFQGVKSDSGNEISTGGGLSGGNLEVSIADSESYVGDAFPSPMDVNVNVDVR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00056 418 ProSiteProfiles Protein kinase domain profile. 49 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00056 418 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 199 403 - -
Adu02g00056 418 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 2 202 - -
Adu02g00056 418 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Adu02g00056 418 Gene3D Transferase(Phosphotransferase) domain 1 152 197 - -
Adu02g00056 418 Gene3D Transferase(Phosphotransferase) domain 1 198 352 - -
Adu02g00056 418 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 199 403 - -
Adu02g00056 418 Pfam Protein kinase domain 200 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00056 418 SUPERFAMILY Protein kinase-like (PK-like) 144 363 IPR011009 -
Adu02g00056 418 ProSiteProfiles PAN/Apple domain profile. 4 70 IPR003609 -
Adu02g00056 418 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 2 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00056 Adu-Chr2 675210 676748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00056 194 354 Receptor kinase-like Gene Family AT5G20050 41.718 2.21e-32 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Adu02g00056 Pkinase 2.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00056 - K03327 gmx:100778917 354.755