Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00037 ATGGAGGAAGGAAGAGATATAGATCCAAGAAGTGGGTTCTGCAGCTCAAACTCAGTGTTCTACAGCAAAAGGAAGCCACTTCCACTTCCACAGAACCCATCCTTGGACGTCACCACCTTCATCTCATCACACGCCCACCATGGCAGGATCGCCTTCATCGACGCCGCCACCGGCAACCACTTCACCTTCCACCAACTCTGGCGAGCTGTGGACGCCGTCGCCTCCTCCCTCTACGACATCGGCATCCGCAAGGGCAACGTCGTCCTCCTCCTCTCCCCAAACAGCATCTACTTCCCCGTCGTCTGCCTGGCCGTCATGTCCCTCGGCGCCATCATCACCACCACCAACCCTCTCAACACCGCCGCCGAAATCCGCAAGCAAATCAACGACTCCAAGCCTCGCATCGCCTTCACCATCCCTCCTCTAGCCTCGAAAATCGCCGCCGCCTCCCCCTCGCTCCCGATCATCCTCATGGAGGCCGACACCAGCAGCAGCTTCCCTTCGGCCGTCACCACCCTCAGCCGCATGATGGAGAAAGAAAGCAGCTCAAGCCGAGTCAAAGAGCGAGTCAACCAGGACGACACGGCCACCCTGCTCTACTCTTCCGGCACCACCGGGCCCAGCAAGGGCGTCGTGTCTTCTCACCTCAACCTCATGGCTATGGTGCAGATCGTTCTCGGCAGATTCAACATCGAGGAGGGCCAGACCTTCATCTGCACTGTCCCAATGTTCCATATATACGGTAGGCTGGTGGCGTTTGCGACGGGACTTCTGGCGGCGGGGGCGACAATCGTGGTGCTGTCAAAGTTCGAGATGCACGACATGTTGTCGGCGATAGAGAGGTACAAGGCGACGTACCTGCCGCTGGTGCCGCCGATTCTGGTAGCGATGCTCAACAACGCCGACGCGATTAAGGGAAAGTACGATTTGAGGTCTTTGCATTCGGTGCTTTCGGGTGGAGCGCCGCTGAGTAAAGAGGTGATAGAAGGCTTCGTGGAGAAGTATCCGAACGTGACCATTCTTCAGGGTTATGGCTTGACGGAGTCCACCGGAGTTGGTGCTTCCACCGACTCCTTGGAAGAGAGCCGCAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAGGAAGCAACAGCGTCTACGCTTGATTCAGAAGGATGGTTAAGAACAGGGGATGTTTGCTTCATCGACAATGATGGCTTCATATTTATTGTGGATAGGTTGAAAGAGCTCATCAAGTACAAGGGATATCAGGTGCCTCCAGCAGAACTAGAGGCCTTGTTGCTCACACATCCAGACATTGCTGATGCTGCTGTCATTCCGTTTCCGGATAAGGAGGCTGGGCAGTTTCCAATGGCATATGTTGTAAGAAAGGCTGGAAGCAGCATTTCGGAGAAGGAAGTCATGGATTTTGTGGCAAAACAGGTGGCTCCATACAAGAGAATTAGAAAGGTCGCTTTTATATCTTCCGTACCCAAAAATCCATCTGGCAAGATTCTAAGGAGGGATCTCATCAACCTCGCAACCTCTAAACTCTGA 1542 0.5428 MEEGRDIDPRSGFCSSNSVFYSKRKPLPLPQNPSLDVTTFISSHAHHGRIAFIDAATGNHFTFHQLWRAVDAVASSLYDIGIRKGNVVLLLSPNSIYFPVVCLAVMSLGAIITTTNPLNTAAEIRKQINDSKPRIAFTIPPLASKIAAASPSLPIILMEADTSSSFPSAVTTLSRMMEKESSSSRVKERVNQDDTATLLYSSGTTGPSKGVVSSHLNLMAMVQIVLGRFNIEEGQTFICTVPMFHIYGRLVAFATGLLAAGATIVVLSKFEMHDMLSAIERYKATYLPLVPPILVAMLNNADAIKGKYDLRSLHSVLSGGAPLSKEVIEGFVEKYPNVTILQGYGLTESTGVGASTDSLEESRRGPTIMKGYFSNEEATASTLDSEGWLRTGDVCFIDNDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPDIADAAVIPFPDKEAGQFPMAYVVRKAGSSISEKEVMDFVAKQVAPYKRIRKVAFISSVPKNPSGKILRRDLINLATSKL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00037 513 CDD 4CL 29 505 - -
Adu02g00037 513 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 364 512 - -
Adu02g00037 513 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 364 - -
Adu02g00037 513 Pfam AMP-binding enzyme 45 355 IPR000873 -
Adu02g00037 513 Pfam AMP-binding enzyme 364 415 IPR000873 -
Adu02g00037 513 ProSitePatterns Putative AMP-binding domain signature. 198 209 IPR020845 -
Adu02g00037 513 SUPERFAMILY Acetyl-CoA synthetase-like 44 511 - -
Adu02g00037 513 PANTHER BNAA06G14440D PROTEIN 364 512 - -
Adu02g00037 513 PANTHER BNAA06G14440D PROTEIN 8 364 - -
Adu02g00037 513 Gene3D - 411 512 IPR045851 -
Adu02g00037 513 Pfam AMP-binding enzyme C-terminal domain 424 499 IPR025110 -
Adu02g00037 513 Gene3D - 17 410 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00037 Adu-Chr2 481283 483888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00037 7 513 Monolignol Biosynthesis Gene Families AT1G20500 61.202 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00037 K10526 - gmx:100811344 784.252