Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00019 ATGGATCGTGGGGACCAAATGGCGTTGTCTGGTTCTGCATCTTATTATATGCAGAGAGGAATGCCTGGTTCTGGAACACAGCAACCTGACTTGCACAATTCGCCTAGTATGCGTCCATTGTCGAATCCTAACCTCTCATTTCAACCAAGTATTGGGGGTAGTACCATTGGATCCACCATGCCATTGGAATCTTCGGGGATGTCATCTCAATGTGTCAATGTTGGTGCCCCTTCTGGAGCTCCTCCCGGAGAACCGGTCAAAAGGAAGAGAGGTAGGCCTAGGAAGTATGGGCCGGATGGAACTGTTTCACTGGCATTGACTCCAACGCCAGCTACTCATCCGGGAACCATGACACAACAAGGCCAGAAACGGGGTAGAGGTCGCCCTCCAGGGTCAGGGAAGAAACAGCAGCTGGCCTCTCTTGGTGAATTGATGTCTGGTACAGCTGGGATGGGTTTCACTCCTCATATCATCACCGTTGCGGTTGGAGAAGACATCGCAACCAAAGTTATGGCGTTTTCTCAGCAAGGGCCTAGAGCAATTTGTATTATGGCAGCCACTGGTGCTGTCTCTACCGTGACACTTCGACAACCTTCAACTTCCGGCGGCACTGTAACATATGAGGGCCGTTTTGAGATATTGTGCCTATCAGGCTCTTACTTACTTACCGATAGTGATGGATCTCGCAATCGATCTGGGGGACTAAGTGTTTCCCTTGCTAGTCCTGATGGCCGTGTTATCGGTGGAGGAGTTGGCGGAGTACTTGTTGCAGCATCTACAGTTCAGGTTGTAGTTGGGAGCTTTATTTGGGGCGGATCGAAGGCGAAGAAACAGAAAAAAGAAGGTTCCTCCGAAGGAGCAGAAGTTGCTATGGAGCCGGATCATCAGACGGTTCATAACATTTCTCCGAATCAAAATCTTACTCCAACCTCGTCTCTAAGTCCGTGGCCTAGTTCGCGACCAATGGATATGCGCCATTCGCATATTGACATCGATTTAATGCGTGGGTGA 1011 0.4985 MDRGDQMALSGSASYYMQRGMPGSGTQQPDLHNSPSMRPLSNPNLSFQPSIGGSTIGSTMPLESSGMSSQCVNVGAPSGAPPGEPVKRKRGRPRKYGPDGTVSLALTPTPATHPGTMTQQGQKRGRGRPPGSGKKQQLASLGELMSGTAGMGFTPHIITVAVGEDIATKVMAFSQQGPRAICIMAATGAVSTVTLRQPSTSGGTVTYEGRFEILCLSGSYLLTDSDGSRNRSGGLSVSLASPDGRVIGGGVGGVLVAASTVQVVVGSFIWGGSKAKKQKKEGSSEGAEVAMEPDHQTVHNISPNQNLTPTSSLSPWPSSRPMDMRHSHIDIDLMRG 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00019 336 MobiDBLite consensus disorder prediction 275 324 - -
Adu02g00019 336 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 268 IPR005175 -
Adu02g00019 336 MobiDBLite consensus disorder prediction 297 318 - -
Adu02g00019 336 CDD DUF296 154 268 IPR005175 -
Adu02g00019 336 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 272 - -
Adu02g00019 336 SMART AT_hook_2 123 135 IPR017956 GO:0003677
Adu02g00019 336 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Adu02g00019 336 MobiDBLite consensus disorder prediction 1 137 - -
Adu02g00019 336 MobiDBLite consensus disorder prediction 105 125 - -
Adu02g00019 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 330 - -
Adu02g00019 336 Gene3D - 155 287 - -
Adu02g00019 336 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 34 330 IPR039605 GO:0003680
Adu02g00019 336 ProSiteProfiles PPC domain profile profile. 149 289 IPR005175 -
Adu02g00019 336 MobiDBLite consensus disorder prediction 11 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00019 Adu-Chr2 307678 312302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00019 1 336 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 51.532 2.42e-90 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00019 - - gmx:100799791 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu02g00019 02 307678 312302 Adu02g00019 02 307678 312302 ECH
Adu04g02394 04 108151462 108155817 Adu02g00019 02 307678 312302 PCT