Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu02g00001 ATGAGTTGCTTTTCATGTTTTTCAAGCCATGAAAAGAAGACAGAAAAGAGGTCAAGGAGGAATGATCATAATGATCAACACCATAAAGCAGAAACGCCTCATCAACCTCTCAAGGAATTAGCCAAACATCATCATCATCATCAAAATAATAATAATTATCAGAACAAGGCAAGGGGAGGCCAACAAACAGAACCTAAAACATTAAACAAAGACACAGGGAGCAATAACATTGCTGCCCAAACGTTCACTTTCCGCGAATTAGCTGCTACTACAAAGAACTTCAGGCAGGAGTGCCTAATTGGGGAAGGTGGATTTGGTAGGGTTTATAGAGGACGACTTGAAAAGACAAACCAAGAAGTAGCTGTAAAGCAACTTGACAGGAATGGATTGCAAGGGAACAGAGAGTTCCTTGTGGAAGTGTTAATGTTGAGCTTGTTACACCATGAGAATCTGGTGAATCTAATTGGATATTGTGCTGATGGAGATCAAAGACTATTAGTATACGAGTACATGCCATTGGGATCTCTTGAGGACCATCTTCTCGATCTTCTTCCACAACAAAAGCCTCTAGATTGGTTCAAAAGAATGAAAATAGCATTACACgccgcaaaagggttagaatatcttcacgacaaagccaatccaccagtgatctaccgtgacttaaaatcctcaaatattttgctcgatagggatttcaatgcaaaattatcagattttggactcgcaaagcttggaccgacaggggacaagactcatgtgtcttcaagagtgatgggaacttatggatactgcgctcccgagtatcaaagaactgggcagcttacagtaaaatcagatgtctatagtttcggtgttgtgttgctcgaattgatcaccggaaggaGAGCCATTGATAATACTAGACCAGCAAGGGAGCAAAATCTAGTTGCCTGGGCATATCCAATATTCAAGGAACCAAGCAGATACCCAGAACTAGCAGATCCCCTTCTAGAAGGAAACTGCCCAATGAGATCATTACACCAAGCAGTTGCAGTAGCAGCCATGTGCCTCAATGAAGAACCATCAGTGAGGCCATTAATCAGTGACGTTGTAACTGCCCTCAGCTTCCTAGGAACAACCCCAGTAGGCCAGGATGGGAATAACAATAATAGAATTGCACCCATTGACATGCCGTCACCGCCACTGGAGCGAGGAACAGACGTCGTTGGTGCCGCGGCGGGCAGTACGGTCACTTTTAACTTAATGGATGATGATAGCATTGCTGAGCGACAAAGAGCTGTGGCTGATGCCATTGAATGGGTTTCCAATAACACAAGGAAATAG 1326 0.3401 MSCFSCFSSHEKKTEKRSRRNDHNDQHHKAETPHQPLKELAKHHHHHQNNNNYQNKARGGQQTEPKTLNKDTGSNNIAAQTFTFRELAATTKNFRQECLIGEGGFGRVYRGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLLPQQKPLDWFKRMKIALHAAKGLEYLHDKANPPVIYRDLKSSNILLDRDFNAKLSDFGLAKLGPTGDKTHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRPAREQNLVAWAYPIFKEPSRYPELADPLLEGNCPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTTPVGQDGNNNNRIAPIDMPSPPLERGTDVVGAAAGSTVTFNLMDDDSIAERQRAVADAIEWVSNNTRK 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu02g00001 441 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 1 435 - -
Adu02g00001 441 CDD STKc_IRAK 100 368 - -
Adu02g00001 441 SUPERFAMILY Protein kinase-like (PK-like) 80 375 IPR011009 -
Adu02g00001 441 MobiDBLite consensus disorder prediction 1 75 - -
Adu02g00001 441 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00001 441 SMART serkin_6 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00001 441 Gene3D Phosphorylase Kinase; domain 1 65 170 - -
Adu02g00001 441 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Adu02g00001 441 MobiDBLite consensus disorder prediction 9 38 - -
Adu02g00001 441 Gene3D Transferase(Phosphotransferase) domain 1 171 383 - -
Adu02g00001 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Adu02g00001 441 PANTHER OS07G0668900 PROTEIN 1 435 - -
Adu02g00001 441 Pfam Protein kinase domain 96 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu02g00001 441 MobiDBLite consensus disorder prediction 52 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu02g00001 Adu-Chr2 90630 94098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu02g00001 1 434 Glycoside Hydrolase AT3G07070 65.324 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Adu02g00001 Pkinase 8.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu02g00001 - - gmx:100786405 636.721