Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g03340 | ATGAAGGGTGTTCTAATTTCCATCAACTTTATCTTTTGTTGCTTCTTACTGTTTTTGGATTCATCAACTTCACTTCCTTTATGCGTTGACTCAAGTGCACCTTTCATCCTCAATAGCACACTTGAATTTTGTCCTTACAATGGAAGCACTTGCTGCAACTCCACAGAAGATGCACAAATTCAGAAACAATTCCAGCTTATGAACATCTCTGATACTACCTGTGCCTCAGCTCTGAAATCGATACTTTGTGCGAGGTGTGATCCGTATTCGGCCGAGCTGTTTACAGTTCAATCGACGCCCCGGTCAGTTCCCTTGCTCTGCAATTCCACCATTGCATCCAATTCCTCCCAGTCAAAGGCAGTAGCAGTGGAAGACTTCTGCTCTCAAGTCTGGGAATCATGTCAATCTGTGTCAATAAAGAACTCGCCATTTTCGCCTTCATTACAAGGCCAAGCAGGGAGAACACCATCTAAAAGCAATCCAAGCAAACTCACAGATCAATGGCAGTCGAAAACAGATTTTTGTACTGCATTTGGTGGATCCTCCACTAGTGAATCTGTATGCTTTGAAGGAGAACCTGTTGCATTAAAGAACACTGACTCAGAAGCTCCTATTAATCCTCCACATGGCTTGTGCCTGGAAAAAATTGGCAATGGATCCTATCTCAACATGGTTGCTCATCCAGATGGCACGAACCGTGCATTCTTCTCGAATCAGAAGGGACAAGTTTGGTTAGCAACTATTCCCATTCCATCCGAAATTCGCAGAAAATGGCCGATAGGCACAGGTAGTAGTGGTGTACAACCCTGCCAATACCAAGCTGTTGTTGCTGAATATACTGCTAATGGTACCGCGTCTCAGCCTTCATCGGCTGTAAGTGCTAAACCAACAGAGGTGAGAAGGATATTTACCATGGGGTTGCCTTCTAATACTGAGAATGGAGGTCAGATTCTCTTTGGACCTGATGATGGGTACTTGTACTTCATGATGGGAGATGGTTCAGGCACTGGTGATCCATACAACTTTGCTCAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTTGATATAGACAACATCCCAAGTGCAGCAGAAATTAGCAAACAAGGTCTTTGGGGTAGCTATTCCATTCCTAAGGACAATCCATTCAGCCAAGACAATGGTTCACAGGCTGAAATATGGGCCTTGGGATTAAAAACTCCATGGCGATGCAGTTTTGATTCAGAAAGACCTTCCTACTTTTTCTGTGGAGATGCTGGACAGGATCTTTATGAGGAAGTGGATCTCATCACAAAAGGTGGAAACTATGGCTGGCGTGTTTATGAGGGTCCCTATCCATTCACCCCTAACGAATCACCTGGAGGAAATACCTCCAAAGACTCCATAAATCCAATTATGCCAATACTTGGATACAACCATTCGGAGGTTAACAAGAATGAAGGGTCAGCATGCATCATTGGGGGTTATATGTATCGATCTAACACTGATCCTTGCATGTATGGAAGGTACCTGTATGCTGATCTATATTCAGTTGCAGTGTGGGAAGCAACAGAAGATCCTGTAAACAGTGGAAACTTCAGCAAAAGCAGAATCCCCTTCAGCTGTTCACATGATTCTCCTATCAAATGTGATCCTGAGCCTGGAACCTCCCTCCCAGCGATAGGCTACATCTACTCATTTGGAGAGGACAACAACAAAGACGTGTATATCCTTACAAGCAAAGGCGTCTACAGAGTTGTTCGTCCGAGTCGCTGCAGCTACACTTGCTCTCAGGAAAAGGCAACAACAGAGGCTCCTTCTCCTTCTACTTCTCCATCTCATGCATGCCAAGTGATTTCTCCCTTTGAAAATCAAATAAGAACGGATCTCCCCCTCCTCCGGCAACCGTCCAACGCCGATCCTCGTCGTCGCCGGAACAGCAACCGCCCCTCTCGCGCGTGCGTCCTCCGCGCCGCTTCTCGCCTCTCAGGTCTCTTCGCCGCGGAGCCTTCACCGTCGATCCATCGGCGGAAGCCGAAGTCCGGGAAGAAAGAGCGCCGGCGGGCGGAGGAGGAGGAGGAGGAAGAAGAAGATGAGGAGTCGCCGCCGCTGTCGCCACAGCAGCAGCAATGCGCGAAGATCGTGACGCAGCTCGTGGAACCGCCGCTGTCGCCTTCGAGGATGCCGCGGTGGAACCTCCGGTGCATGTGGGAGTTGGCTTCGGTGCTCAATTTTTTGCATCTGTTTAGGCCACTTTTGAATATCTCACTTGAATTTTCTGCTGAAGAGTTCGAGACTGCACTTCTTACTCCCAATGACACTTTGAGTGATATACATATGCCTTTGCTTAAGGCAATCCCTCCTATTATACGCATGGCACTCACACGTGATACTTGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAATTGTTGCGTCACATGGGACGGAAATTGAAGTATATAAATCGCTTGATCCAGGGGTTCGTCTTGTGATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGGAATTATATTGACAACTCCCTCAAACATGGTGTTAAACTTTCAACATTTCGTAAAGAGCGAATTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAGTTGTTGGTCACAGGCTGTATCGAGAAACAAGAAAAACTGAAGTGATTCAAATGAAGAAAGGGAAACCAAGAGGTTCACTGGTTCTTTCTAATACATCATACCAGTGGGAATCTGTAGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGGACAGAGATCTCTGTGGGGAAAAAGCTAAAGATAGACATGCTTCCTGAAATTGAGAAAGTCCATAAGAGAAAGGAAAAGTTGCTGAAAAAGCAACAGAGAGAGGCCCTTCTTCTTGATAATTACATGATTGCTGATGGTCTTGCTACCGGACGTTCACTGCGTTATAGGAAGCCTGTTACCTACACTTTCGATGATTATGATAAGTCCATAAATGAGGCAATCAAAGAAACCAAACGGAAACAACCATCCCCAGAATCCATGCCCAAGAGAGAGTTGGTAGCAAAACCGGAAGCTTTTAGTAATGGTAAATGGAGTGGTCCTTCACATTCCCCTCAAAATCTGAATTTTGGTTGGTCATCTCCAAAATCACCTTACTCTGATGATGATGAGGAAGACCATATAACGGATCCACTTGATCGAACAAATCGTCGAAGACAGAGACCGAAGCGGTATTCAGATAAAGAGTTCCTTGATCCTGTATCAGATAATGATGCTGACTTTGACAGCGATGATGATATTGTTGGAGAAGCTGTATATGATGAAGAGTATCTCAAGAAGCGTAAGCAGAGAAGGAAGCATTCTAGTAGCTCCGAAGGAGATGAAGAATATCAGTGGGATGAAGATAATGTCGAAGAGGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGATGATGATGACGATGAAGATTCCTTGAGTATCAGTGAGGACAGTGACAAACCCCGCAAGTTCAAGGCATTGCGAGGCCGTACTACGAGGGATTCTAAACGCAGGCCTGTCAATGATTTTCAATCAGGTCTAAGGCGCAGTAAGAGGTCAACCCGAAACCGTGTAAATTACCGACAATACGAGGCGTCTGAATCAGAACAAGAGTTTATTAAACCTGAAAAGTCTAATACATCAGCTGATCACTCAGATCCCAGTGAGAATGGGGAATATATGATGGAAAGTGAAGATTCCGACCGGAATGATGATGAAGACCAGGAAATGAAAGTAGAAGAGCAGCCTGCTACTTACCCCATAGTTGAAGAGAATGAACAAAATGCACCTCCCGAAAAGTCAAGTAGTCCTGGTCAGGAGGAAGTTGAGAGCATCGGAAAGCACCATTTCCTTGATTTGAACGAGCTCGCCCCTAGCTCGGGTTTCGATGATGGTCCAAATACAATAATGAAAGATGAAGACAATGAATGA | 4032 | 0.4482 | MKGVLISINFIFCCFLLFLDSSTSLPLCVDSSAPFILNSTLEFCPYNGSTCCNSTEDAQIQKQFQLMNISDTTCASALKSILCARCDPYSAELFTVQSTPRSVPLLCNSTIASNSSQSKAVAVEDFCSQVWESCQSVSIKNSPFSPSLQGQAGRTPSKSNPSKLTDQWQSKTDFCTAFGGSSTSESVCFEGEPVALKNTDSEAPINPPHGLCLEKIGNGSYLNMVAHPDGTNRAFFSNQKGQVWLATIPIPSEIRRKWPIGTGSSGVQPCQYQAVVAEYTANGTASQPSSAVSAKPTEVRRIFTMGLPSNTENGGQILFGPDDGYLYFMMGDGSGTGDPYNFAQNKKSLLGKIMRLDIDNIPSAAEISKQGLWGSYSIPKDNPFSQDNGSQAEIWALGLKTPWRCSFDSERPSYFFCGDAGQDLYEEVDLITKGGNYGWRVYEGPYPFTPNESPGGNTSKDSINPIMPILGYNHSEVNKNEGSACIIGGYMYRSNTDPCMYGRYLYADLYSVAVWEATEDPVNSGNFSKSRIPFSCSHDSPIKCDPEPGTSLPAIGYIYSFGEDNNKDVYILTSKGVYRVVRPSRCSYTCSQEKATTEAPSPSTSPSHACQVISPFENQIRTDLPLLRQPSNADPRRRRNSNRPSRACVLRAASRLSGLFAAEPSPSIHRRKPKSGKKERRRAEEEEEEEEDEESPPLSPQQQQCAKIVTQLVEPPLSPSRMPRWNLRCMWELASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLSDIHMPLLKAIPPIIRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGTEIEVYKSLDPGVRLVILKALCDIRVEQEDIRNYIDNSLKHGVKLSTFRKERIGGDSHGISYWYEDDPVVGHRLYRETRKTEVIQMKKGKPRGSLVLSNTSYQWESVATNFDEFQDVSEKLFSSKNRTEISVGKKLKIDMLPEIEKVHKRKEKLLKKQQREALLLDNYMIADGLATGRSLRYRKPVTYTFDDYDKSINEAIKETKRKQPSPESMPKRELVAKPEAFSNGKWSGPSHSPQNLNFGWSSPKSPYSDDDEEDHITDPLDRTNRRRQRPKRYSDKEFLDPVSDNDADFDSDDDIVGEAVYDEEYLKKRKQRRKHSSSSEGDEEYQWDEDNVEEEEEEEEEEEEEDDDDDEDSLSISEDSDKPRKFKALRGRTTRDSKRRPVNDFQSGLRRSKRSTRNRVNYRQYEASESEQEFIKPEKSNTSADHSDPSENGEYMMESEDSDRNDDEDQEMKVEEQPATYPIVEENEQNAPPEKSSSPGQEEVESIGKHHFLDLNELAPSSGFDDGPNTIMKDEDNE | 1343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g03340 | 1343 | Coils | Coil | 1147 | 1177 | - | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 1229 | 1264 | - | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 1050 | 1069 | - | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 1046 | 1343 | - | - | |
Adu01g03340 | 1343 | Gene3D | - | 198 | 583 | IPR011042 | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 1071 | 1108 | - | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 143 | 166 | - | - | |
Adu01g03340 | 1343 | Pfam | WSTF, HB1, Itc1p, MBD9 motif 1 | 826 | 856 | IPR028942 | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 621 | 645 | - | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 661 | 704 | - | - | |
Adu01g03340 | 1343 | Pfam | Glucose / Sorbosone dehydrogenase | 294 | 466 | IPR012938 | - | |
Adu01g03340 | 1343 | SUPERFAMILY | Soluble quinoprotein glucose dehydrogenase | 300 | 451 | IPR011041 | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 1148 | 1181 | - | - | |
Adu01g03340 | 1343 | PANTHER | DDT DOMAIN-CONTAINING PROTEIN DDR4 | 619 | 1342 | - | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 1200 | 1216 | - | - | |
Adu01g03340 | 1343 | Pfam | DDT domain | 735 | 780 | IPR018501 | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 1109 | 1124 | - | - | |
Adu01g03340 | 1343 | PANTHER | REMODELING AND SPACING FACTOR 1 | 619 | 1342 | IPR028938 | GO:0006355|GO:0031213 | |
Adu01g03340 | 1343 | Coils | Coil | 961 | 981 | - | - | |
Adu01g03340 | 1343 | MobiDBLite | consensus disorder prediction | 1125 | 1147 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g03340 | Adu-Chr1 | 106597550 | 106609245 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | DDT | Adu01g03340 | GSDH | 4.9e-16 | CL0186 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g03340 | - | - | aip:107610968 | 1135.55 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu01g03340 | 01 | 106597550 | 106609245 | Adu01g03340 | 01 | 106597550 | 106609245 | ECH |