Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03338 ATGTATGGAGAGCCTCCATCAATATGGGGGGCTGCGTGTTATTATGGGTGCTATATGCCATCATGGTATGTTATGCAGGAATGTGGAACAGCAATATTGTCTGAGCCAACATGCAGGTTACGTGTTGTTTTAGGAGGAAGTAGATTTTGCAGGGATGAGAAATGCGTGACGAGCCCTCATCAATACATAGGTCGTGTGTTGCTTTTTGTGGAAGCAGCTTTTGTAGACAAGAAGGACGCGAGGAATGTAGAACTGCAACATTGTCTGAGCCAACACATAGatggggatgaggatgaggatacggatgatgatgaggacgacgatgaagatgaggaggatggtgaggatgaagaTGATGGGGGTGATGGTCTGGATGATGGTTCAGCGCCTACTAACGATGTCGTTGGTCCGGCTGAACCCGTCGGCCCGGCTGAACCGGTCGGTCCGGTTGAACCCGTTGGCCCGGCTGAACCGGTCGGCCCGGCTGAACCCGTCGTTCCGGCTGAACCGGTCGGTTATCCTGAACAGGTTATCTTTATTGCGTTGGATAGACACGTGAAAAATGTGGTATCTACATATTCCCTTGAACATAAAAGCACCAATGACCTCTACGATTCCATTATTCACTTATTGGATGAGCCGATGCCCCTGCATAAGAATATTTCCAAGCTGTTCCAAGAACTTGTGTACTGCATCGGCATCTTGCAAACTTCCATCTACCAACATATGCTGAAAGAAGAAGAGCAGGTTTTTCCACTGGTGATACAAAAATTACCTACCGAAGAACAGGCTTCGCTTGTGTGGCAATTCATATGTAGTGTTCCTATAATATTGCTGGAGGAACTTTTGCCATGGATGGTATCCTTCCTTTCCGAAGAGAAACAAGCAGAAGTCACTCAGTGTATAAATGAAATTGCACCAATGGAAAAAACACTCCAAGAGGTTTTGGTTTCTTGGATTGGAAGCAACAAACAAAGCTTCACTGAAGTCTCTTTTAAGGATGAAGTTCAAGGTGGTGCTCAATCCTTAGATATTGCAAGATCATTTCCGTTGGGTTCTTGCAATAGGAACTTCAAAGAACTTTCAAGTCAGATGGAAGTGAATGGCCCAAAAGACAAAGATGGGACAACCCAGGTTAATGTTCTTCATCTTTGGCATGATGCCATCATAAAGGATTTGGAAGAAATTCTGAAAGAACTTTGTTTAATAAAAAACTGCAGCTGCTTTCAGAATTTAGAATCACTGCTTATCCAACTGAAATTCTTTGCTGATGTCCTCACGTTCTACAGCAATGCTCAGAAAAGATTAGTATTGAAGAAACTTGCTGGTGACTGGTTGTCAAAGTCTACGGAAAACTTTTGTGATGTAAGTCACATTGAAGATTTACAGCAGTTGTTATTCTATAGATCGGAAAGTGGAATGCCTTTGTGCGAATTCGTAGGGAACCTTTGTCAAAAACTTGAATCATTCGTATCAAGGCTCAGAAAACAATTCGCCTTTCAAGAAAATGAGGTATTTCCTGTCATTAGAAAGAATTGCAGCAATGGGATGCAAGAGGGACTTCTGAGCTTGAGCCTGTATATGATGCCACTTGGGTTAGTAAAGGGTGCTATAACTTGGTTTTCAGTTCACCTGCCTGAAAAAGAATCCAGGTCCATTCTCTATTTCAAAAAGAAAGGAAATGATGTTGCCTGTAAAGGTTTTGCATCGCTCTTACAAGAGTGGTTCCGCATTGGGTATTCAGGTAAAACTGCTATTCAAAAATTCCGACAGGACTTGCACCATATGTTCAAAAGCAAATACTCTTTCTTACCTGAGCAAATCAAGAAAGCGCCTGGGTTTTCTTTAAATTCTGACTGCCTGCCTCATAAGGTCTCTAGCAAGATGTGTCTGTCCTATCCCTCACCTTCGGGATCCAACAAGTACGACACACCATACTCCACAGGAATTAATCTGCATATACTTTTTCCGGCCACAGTTGTTAAGTTGCATCAGAAGCTGGGATGCCATGCGGCAAATAGTTCTTCTGTTTCCTTTCTTGAAGATCCAAAACCAATTGACATAATATTTTTCTTTCACAAGGCTATCAAGAAAGATTTGGACTACCTAGTTCTTGGCTCAGCTCAGTTAGAAGACAATGCTGAGTTGCTTATGGATTTCCACAAGCGATTCCACATCATATATTTTCTTTATCAAATCCATAGTGATGCAGAGGATGAAATAGTTTTCCCAGCTTTGGAGGCAAGTGGTAGGCTAAAAAACATTAGCCATGCCTACGCTTTCGATCACAATGTTGAAGTTAAACACTTCAATAAAATATCCCACATCCTTCATAAGATGTCTGAATTAGATATTTCGGTTTCTACATCCTTGGTAAGGTATCAGCATTTATGTAGGAAGCTGCAACAAATCTGCAAATCAATGCATAAATCACTTTCAGGCCATATTGACCGGGAGGAAGCAGAAATTTGGCCTCTAAGTAGAGAATTCTTCTCAAATAAGGAGCAAGGGAAGATCATAGGATGCATGCTTGGAAGAATAGGAGCACAGATATTGCAAGATATGATACCTTGGCTAATGGCATCGTTAACACAGAAAGAACAGCATGTTTTAATGTTCTTATGGTCCATGGCTACTAAAAATACAATGTTCAACGAGTGGCTAAGTGAATGGTGGGATGGGTACAGTATAACTAAGCCAGAAGAGGGAACAAAGCATGCACTTAAAGAGACTGTTGAGCCACTGGAGATAATATCTAAATACTTTTCTGAAGAAGTTCTTGATGAATTACAAGAAGAACCCTCATCCAACACAAATACTGATTTTCATCAGAAGGATCATATTGGTGATAATGTCCAGCTGTCTAACAACAAATTTGATGGCACAGTTAAGGTTCAAGCTGCAGCACAGAATAAAAATGAAATTTCAAAATCCACAAATCGTTTTCATGATAACAACAAACATGGTTGGAATCAAGAAAAGGAAGGAATCACAAATCCAATCAAAATTGAAGATCAATCATTTCAATTTCGTCACAATTCCAGGCATTATGACCGGCTTCTGAAACTGAGTCAAGATGATCTGGAGAAAGCAATAAGAAGGGTAACTCGCGATTCCTCCTTAGATCCTCAAGAAAAGTCATACATAATACAGAACCTGCTAATAAGCCGTTGGATTATTAGACAGAAGATATCCTTTACAGAAGTTGATGTCAAAAATGATGAGCAGGAATTTCCTGGGAAGCATCCATCCTATAGGGATCCTCTCAAACTAATTTATGGTTGCAAACATTACAAGAGAAACTGTAAGATTTTTTGCCCCTGTTGCAACCAACTTCATACTTGCATACATTGCCATAATGAGGTATCGGACCATATAATTGACAGGAAATCTATTACAAAAATGATGTGCATGGAGTGCTTAAACATTCAGCCCATTAATGCCACATGCTCAACTTCTTCCTGCAAGTTAACCATGGCAAAATATTACTGCTGGATCTGCAGATTATTTGAGGATGAAAAGGAAATTTACCACTGTCCCTATTGTAACCTGTGCCGAGTTGGGAAGGGATTGGGTACCACGTACTTTCATTGCATGAGTTGCAATGCATGTATGTCGCGTAGTCTTTTGGTACACACATGCCGGGAAAAACATTTAGAGGACAACTGTCCAATTTGTCATGAATATATCTTCACATCCCTGGCTCCGGTAAAAGCCCTTCCATGTGGTCATGTGATGCACTCAGCATGCTTTCAGGAATATACCGGCTTTAACTATACCTGCCCCATATGTAGCAAGTCAATTGTAGACATGCAGGACTATTTTAAGAAGTTAGATTCTTTATTGGCCGAAGAGAAAATGTCTGATGAGCTTTCCAGTCGAACTCAGGTTATATTATGTAATGACTGCGAAAAGAAAGGAGTAGCTCCCTTCCACTGGCGTTACCACAAATGCCCTTATTGTGGTTCCTACAACACCAGAGTTCTATGA 3990 0.4005 MYGEPPSIWGAACYYGCYMPSWYVMQECGTAILSEPTCRLRVVLGGSRFCRDEKCVTSPHQYIGRVLLFVEAAFVDKKDARNVELQHCLSQHIDGDEDEDTDDDEDDDEDEEDGEDEDDGGDGLDDGSAPTNDVVGPAEPVGPAEPVGPVEPVGPAEPVGPAEPVVPAEPVGYPEQVIFIALDRHVKNVVSTYSLEHKSTNDLYDSIIHLLDEPMPLHKNISKLFQELVYCIGILQTSIYQHMLKEEEQVFPLVIQKLPTEEQASLVWQFICSVPIILLEELLPWMVSFLSEEKQAEVTQCINEIAPMEKTLQEVLVSWIGSNKQSFTEVSFKDEVQGGAQSLDIARSFPLGSCNRNFKELSSQMEVNGPKDKDGTTQVNVLHLWHDAIIKDLEEILKELCLIKNCSCFQNLESLLIQLKFFADVLTFYSNAQKRLVLKKLAGDWLSKSTENFCDVSHIEDLQQLLFYRSESGMPLCEFVGNLCQKLESFVSRLRKQFAFQENEVFPVIRKNCSNGMQEGLLSLSLYMMPLGLVKGAITWFSVHLPEKESRSILYFKKKGNDVACKGFASLLQEWFRIGYSGKTAIQKFRQDLHHMFKSKYSFLPEQIKKAPGFSLNSDCLPHKVSSKMCLSYPSPSGSNKYDTPYSTGINLHILFPATVVKLHQKLGCHAANSSSVSFLEDPKPIDIIFFFHKAIKKDLDYLVLGSAQLEDNAELLMDFHKRFHIIYFLYQIHSDAEDEIVFPALEASGRLKNISHAYAFDHNVEVKHFNKISHILHKMSELDISVSTSLVRYQHLCRKLQQICKSMHKSLSGHIDREEAEIWPLSREFFSNKEQGKIIGCMLGRIGAQILQDMIPWLMASLTQKEQHVLMFLWSMATKNTMFNEWLSEWWDGYSITKPEEGTKHALKETVEPLEIISKYFSEEVLDELQEEPSSNTNTDFHQKDHIGDNVQLSNNKFDGTVKVQAAAQNKNEISKSTNRFHDNNKHGWNQEKEGITNPIKIEDQSFQFRHNSRHYDRLLKLSQDDLEKAIRRVTRDSSLDPQEKSYIIQNLLISRWIIRQKISFTEVDVKNDEQEFPGKHPSYRDPLKLIYGCKHYKRNCKIFCPCCNQLHTCIHCHNEVSDHIIDRKSITKMMCMECLNIQPINATCSTSSCKLTMAKYYCWICRLFEDEKEIYHCPYCNLCRVGKGLGTTYFHCMSCNACMSRSLLVHTCREKHLEDNCPICHEYIFTSLAPVKALPCGHVMHSACFQEYTGFNYTCPICSKSIVDMQDYFKKLDSLLAEEKMSDELSSRTQVILCNDCEKKGVAPFHWRYHKCPYCGSYNTRVL 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03338 1329 Gene3D - 1294 1329 - -
Adu01g03338 1329 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 176 1329 - -
Adu01g03338 1329 Pfam Ring finger domain 1221 1264 IPR001841 -
Adu01g03338 1329 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 176 1329 - -
Adu01g03338 1329 ProSiteProfiles Zinc finger CTCHY-type profile. 1159 1222 IPR017921 -
Adu01g03338 1329 ProSiteProfiles Zinc finger RING-type profile. 1223 1265 IPR001841 -
Adu01g03338 1329 MobiDBLite consensus disorder prediction 88 161 - -
Adu01g03338 1329 SUPERFAMILY Zinc hairpin stack 1160 1214 IPR037275 -
Adu01g03338 1329 Pfam Zinc-ribbon 1269 1327 IPR039512 -
Adu01g03338 1329 ProSiteProfiles Zinc finger CHY-type profile. 1088 1157 IPR008913 GO:0008270
Adu01g03338 1329 CDD Hr-like 687 825 - -
Adu01g03338 1329 MobiDBLite consensus disorder prediction 95 124 - -
Adu01g03338 1329 SMART ring_2 1223 1264 IPR001841 -
Adu01g03338 1329 SUPERFAMILY RING/U-box 1210 1271 - -
Adu01g03338 1329 Gene3D nmb1532 protein domain like 681 844 - -
Adu01g03338 1329 Gene3D nmb1532 protein domain like 174 272 - -
Adu01g03338 1329 MobiDBLite consensus disorder prediction 142 161 - -
Adu01g03338 1329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1216 1267 IPR013083 -
Adu01g03338 1329 CDD RING-H2_Pirh2 1222 1265 - -
Adu01g03338 1329 Pfam CHY zinc finger 1095 1169 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03338 Adu-Chr1 106548638 106569793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03338 175 920 C2H2 Transcription Factor Family AT3G18290 30.085 1.42e-105 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03338 K16276 - gmx:100802706 1744.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03338 01 106548638 106569793 Adu01g03338 01 106548638 106569793 ECH