Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03321 ATGGCGGGTGGGAGGCTCTTCAGCTCTGCCTTCTCCAACACCAACAACAGTAACACTCTTCTTCTTCATCAGAACCAAGCTTCCCAGCCTCTTCCTCCTCCGTCTCTCTTCCTATCTTCATCACTTCCTTTTCTCGGTTCTCGATCCATGGTGAGCTTCGAAGATGTTCCAGGAGGGAAGGGGTGTAAAAATGGGTCGTTCTTCCGGACATACGACCCGGCGGAGGAGGACGGGGAGGAGAGCATGGAGGAGTACTTGACGCAGCCGGCGGAGAAGAAGCGGCGGCTATCGGCGGAGCAAGTGGCGATCTGGTTCCAGAACCGCCGCGCACGGTGGAAGACGAAGCAGCTGGAGAAGGATTATGATTCCCTTCAGGCTACCTTTGACACCCTTAAGGCCAACTACGATAACCTCCTCAAGGAGAAAGATCGCTTGAAAGCAGAGGTAGCAAGGCTGACGGAGAAGGTGGTTGCAAGGGAGAAAGAAGGCGAAGACAAGAGTGAAAGAAAGGGAATGCAGGAGGCAACCGCAGCAGCAGTTTCATCAGAAGGCGAAGGGTCCAAGATATCAGTGAAGAGTGATATGCTGGATTCGGATGACAATATAAATAGCCCCTACTACCACACAACCTCTGGAATGTTCGAGGCCGATCAATCGGATCTGTCACAGGACGAGGAAGAGAATCTCATAAATCGGAGCCTCTTGCATCCATACCTCATCTTCCCTAAACTTGAGCATGTTGAATACTCCGACCCGCCTGAGACTTCATGTAACTTTGGATTCGCTCATGAAGATCATGCTATTTGGTCCTGGTCTTATTGA 822 0.5134 MAGGRLFSSAFSNTNNSNTLLLHQNQASQPLPPPSLFLSSSLPFLGSRSMVSFEDVPGGKGCKNGSFFRTYDPAEEDGEESMEEYLTQPAEKKRRLSAEQVAIWFQNRRARWKTKQLEKDYDSLQATFDTLKANYDNLLKEKDRLKAEVARLTEKVVAREKEGEDKSERKGMQEATAAAVSSEGEGSKISVKSDMLDSDDNINSPYYHTTSGMFEADQSDLSQDEEENLINRSLLHPYLIFPKLEHVEYSDPPETSCNFGFAHEDHAIWSWSY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03321 273 Pfam Homeodomain 95 113 IPR001356 GO:0003677
Adu01g03321 273 Gene3D - 83 108 - -
Adu01g03321 273 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54 97 270 - -
Adu01g03321 273 Gene3D - 109 160 - -
Adu01g03321 273 Coils Coil 107 162 - -
Adu01g03321 273 ProSiteProfiles 'Homeobox' domain profile. 67 115 IPR001356 GO:0003677
Adu01g03321 273 Pfam Homeobox associated leucine zipper 115 156 IPR003106 GO:0006355|GO:0043565
Adu01g03321 273 MobiDBLite consensus disorder prediction 160 195 - -
Adu01g03321 273 SUPERFAMILY Homeodomain-like 94 124 IPR009057 -
Adu01g03321 273 CDD homeodomain 85 116 IPR001356 GO:0003677
Adu01g03321 273 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 97 270 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03321 Adu-Chr1 106148463 106150027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03321 92 199 Homeobox Transcription Factor Family AT3G01470 45.299 8.84e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Adu01g03321 HALZ 5.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03321 - - gmx:732618 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03321 01 106148463 106150027 Adu01g03321 01 106148463 106150027 ECH