Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03304 ATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTATTGTTTGGGAAGAAGTCATCGAAATCAAATATTTCAAAAGGAAGAGAGAAGCTTGTTAATCAAAAGGAAGGAGTGGTGACTTCCAAGGTATCAGAAACTGATTTGGCTTTAGATCCAACCCCCATTACCGTTGCCAAAAATGAGGAAGAGCTGGTGCTGGAGAATAATGAGTCAGAAACTGTTTTAAATGAAAATCAAGAAATAAACACAGTGGGATCTGTTCTCCAAGATTCACCACCTGATCCAGAGAAAATAAAGCTGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTACTTGGCACGAAGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACCTTGTTAGGAGACAAGCTGTGGCTACATTATGCTGTATGTATGGCATTGTCAAGTTACAAGCACTTGTTCGTGGCAGAAGAGTCAGACAGTCTGTTGTTGGGTTTGAAATCCAAGAGAAGTGCAATCTATTGAAGTCTCCGGATGGCAAACCTGTCAAGCCAATTGCTGTACCTGCAAAAATTACAAATCTGTCAGCCAATGCTTTCATCCGAAAGCGTCTTGCTTCATCAACTACTATAATGGCCCTGCATTTGCAATATGTTCCTGGAGATCCAAATTCAGTTCTAAGCTGGTTGGAGCGCTGGTCAGCAACTAACTTTTGGAAACCAGTCCCCCAACCAAAGAAAATTCGAGACACTAAGCATCAGAGAAAGCAGGGTACAATTTCAGTGGGAGAAGCTCCATTGAGCAAGTCAAGACGTACCACCCGGAAGGTTCCTGCTGCAAGTTTTGACCCTGCCCCAGTGCAAGCAAATCCTGAACTTGAGAAGCCAAAACGAAGCTTGAGGAAAATTTCAAGCCAGCCCTCAGATACTCTGCAGGAAAATCCACAAAGTGAGCTTGAAAAGGTAAAGCGTAACTTGAGAAAGGTTCACAACCCAGTTGTTGAGAATGCTATTGTCCCAGAAGTAGAACTCGAGGTCCCAAAGCAACATTTGGAAAAGGGGGCATTTACCCCAGTGCATGGTGTTTCGGAACAAGGGGTAACTAGTTCTGATGAGAAGAATAACAAAGAACCAACTTTAACCATTTCTAATGTGCCCGATACAGAACCTGCTACAAATTATATTAGTAAGGAGGTGTCTGATATGCCAAGCCATTATCAAGTGGTTGTGCAACCAAAGCCTTTGACCGAGATTATAAGTAAAGATGAAAACATTGCTGAAGATGAAGTGAAAACAGAGCCAAAAGATTTACCAGAGACTAGTTGCAAGGTTGAAAATTCTCACATAACAAATGGAGATTTGAGTCACAAGGAAGATCCTGTGGGAACTGAAAACCAGAAGCCGAACAGAAAGGCCTCAAATGTAGTGAAGCAAGAGCGTGCTGATAATGGTTTACAGAACAGTCCAACTTTACCAAGTTACATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCTCAAGGATCCCCACGATTAGGACACGATGGAAGTGAGAGAAACAATGTTGCTCGGAGACATTCTCTGCCATCTTCAACTAACACCAAAATTAGCTCACAGTCACCTAGGACACAGAGACCAGTCCAATCAGGTGGCAAAGGAAGCAACAAACCTGTACCTTCTAGAGACGGCAATGGAAAGGTAATTCAAGCAGAATGGAGGAGGTGA 1740 0.4351 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQKEGVVTSKVSETDLALDPTPITVAKNEEELVLENNESETVLNENQEINTVGSVLQDSPPDPEKIKLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMYGIVKLQALVRGRRVRQSVVGFEIQEKCNLLKSPDGKPVKPIAVPAKITNLSANAFIRKRLASSTTIMALHLQYVPGDPNSVLSWLERWSATNFWKPVPQPKKIRDTKHQRKQGTISVGEAPLSKSRRTTRKVPAASFDPAPVQANPELEKPKRSLRKISSQPSDTLQENPQSELEKVKRNLRKVHNPVVENAIVPEVELEVPKQHLEKGAFTPVHGVSEQGVTSSDEKNNKEPTLTISNVPDTEPATNYISKEVSDMPSHYQVVVQPKPLTEIISKDENIAEDEVKTEPKDLPETSCKVENSHITNGDLSHKEDPVGTENQKPNRKASNVVKQERADNGLQNSPTLPSYMAATESAKAKLRAQGSPRLGHDGSERNNVARRHSLPSSTNTKISSQSPRTQRPVQSGGKGSNKPVPSRDGNGKVIQAEWRR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03304 579 PANTHER IQ-DOMAIN 5-RELATED 1 562 - -
Adu01g03304 579 MobiDBLite consensus disorder prediction 528 560 - -
Adu01g03304 579 MobiDBLite consensus disorder prediction 365 395 - -
Adu01g03304 579 MobiDBLite consensus disorder prediction 424 579 - -
Adu01g03304 579 Gene3D - 97 146 - -
Adu01g03304 579 MobiDBLite consensus disorder prediction 424 446 - -
Adu01g03304 579 MobiDBLite consensus disorder prediction 366 395 - -
Adu01g03304 579 Pfam Protein of unknown function (DUF4005) 483 561 IPR025064 -
Adu01g03304 579 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Adu01g03304 579 PANTHER PROTEIN IQ-DOMAIN 31 1 562 - -
Adu01g03304 579 MobiDBLite consensus disorder prediction 454 469 - -
Adu01g03304 579 SMART iq_5 98 120 IPR000048 GO:0005515
Adu01g03304 579 SMART iq_5 121 142 IPR000048 GO:0005515
Adu01g03304 579 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Adu01g03304 579 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Adu01g03304 579 MobiDBLite consensus disorder prediction 247 322 - -
Adu01g03304 579 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Adu01g03304 579 MobiDBLite consensus disorder prediction 483 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03304 Adu-Chr1 105926361 105932106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03304 1 579 IQD Protein Family AT1G74690 44.828 9.02e-127 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03304 - - ahf:112710449 1074.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu03g03869 03 127449620 127457541 Adu01g03304 01 105926361 105932106 ECH
Adu01g03304 01 105926361 105932106 Adu01g03304 01 105926361 105932106 ECH