Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03303 ATGTTCAACCCAGCTAGCTTCTGGACACAGGCTAACGCTCTTCTCCGCAAGAACTTAACTTACCAGAAACGCGATGTCAAGACCAACGTGAGGCTGGTGCTGTTCCCGGTGATCCTCGTCGTACTGCTCTACGCGCTCCAAACGGCGGTCGACATCGTGCAGAGCGCGTCGCTTCAAGACGAGAAGAAGACGAAGGCCGCCGCCTGCAAAGGCTGCGTCTGCGTTCACGACATCGGGCGCCATGCCAAGTGCCCGGACTCAGAGAAGGTGTGTGGGCCCCGATTCTTGGGCCCCGAGGATGCCAACACGTGTCCCGTACCCTACCCGCCGGAGTGGCCTCCCCTTTTGCAACTTGAAGTCGGCGACGGACTCTTCAGCAATGATGCCGCCCGCAATGTCACCATGCTCTTCACTGGCACTGACCAATTTTTTGGAGAAAGTTTATTTGGAACTATGTTCCCAACTGAGTTGAGTATAAATGAGTCTGATATCATGGCTAGTTTGGCATCAGTTGTTCTGGGAACTGAATTTGGGTTGGATTTAACCGTTTTTGTGGACCCTGCGTTAAGTATTAACTCTCGTATCCTTTATCGTCTACAACAAGATCAGTGTAAGGTGAACTCTAGTTTCTCCTTTAACTTCAACGAGGGAGACTCCAAAATGATCCCAGATGTTAAGGTGAATTGTACTCAGGCTTCTACCTTATGGCGCAAGAGTTTTTCTGATATATGGGATGAGCTTCAACTTGAAGATCGTGATGATGATAAGATAGGTTATTACAAGTTACACAAGAATCCTATTAGTGGAGCTTTTGACTTTCTAAATTCGAATAAGAATATTTTTAATGTTAGCTTTTTAATTTACAAACATGACAATAGAGATAAGATCAACATGAACCGCACTCCTCGTTCTGTAAATATGATATCAAATGCCTTCTTGAAGTTTTTGCTGGGAAATGGTACCAAGATGTTATTTGACTTTATAGGGGAAATGCCAAAACCTGCATCCTCAGACACAACAATGATTGATATAACTTCTCTCCTGGGTGGTTTGTTCTATACATGGGTCATCCTTCAACTGTTTCCTGTTATTCTGATATCGTTGGTGTATGAGAAGCAGCACAAAATAAGAATGATGATGAAAATGCATGGTCTTGGAGATGGACCATACTGGTTGATTTCCTATGCTTATTTTCTTGCCATTTCCATGGCCTACATGCTGTGCTTTGTGTTAATGGGTTCATTCTTTGGATTCCATTTCTTCAGAGAGAATAACTATGGAATCCAGTTCGTGTTTTATTTTATCTATGTAAACTTACAAATTGCCTCCGCGTTTCTGGTGGCTGCCCTGTTTTCGAATGTTAAGCCTGCTACAGTTACAGCATATATAGTTGTCTTTGGAACTGGACTGGTAGCTGCCTTTCTTTTCCCAGATTTGCTGAAGAATGATCTATTTCCAAAAAAATGGATCATTGTTTTCGAGTTTTATCCTGGGTTTGCTTTATTTCGCGGGCTAAATGAGTTTGCGGAATATGTCAGTGTTGGAAATAGTTCAGGGACCCTTGGCATGAGGTGGCAGGATCTGAATGATAGCACAAATGGCATGAAACAGATCTTAATCATCATGTCAATTGAGTGGATAGTTTTTCTTTTTGTTGCTTACTACCTTGATCAAGTTTCCTCATCAGCAAGTGGGAGAAGTCCATTTTTTTTCTTGAAAGGATTCCAGAAGAAGACACCTTTGTCTTCCCAAAACGACAATATGCCAATGCAGGGGTCAAGAGCCTTGGCTCAGATGGATAAACCTGATGTAATCCAACAGAGGGAGAAAGTGGAGGAGCTGCTACTTGAACCGGCCGGCAATCACAGAATAGTTTGCAACGAGCTGAGAAAAGTCTATCAGGGAAGGGACGGAAACCCGGATAAAGTAGCAGTGAGAGGGTTGTTCCTTGCTGTTCCTCAAGGGGAATGCTTTGGCATGCTTGGTCCCAATGGTGCTGGAAAGACTTCTTTTATTAGTATGATGATTGGTCTGACAAAGCCAACCTCTGGTACTGCATTTGTTCAAGGCATGGACATAAGAACTGATATGAATGGACTATACACAAGCATGGGTGTATGCCCCCAACATAACTTGCTGTGGGAAAGGTTGACAGGAAGAGAGCACCTACTTTTCTATGGCAGACTTAAAAACCTCAAAGGTTCAGCCTTAACACAGGCAGTAGAAGAATCTTTGAAGAGTTTAAACCTTTTCAATGGAGGAGTTGCTGATAAACAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGCGTTGCAATTTCTTTGATTGGGAATCCCAATGTTGTTTATATGGATGAGCCAAGCACCGGATTGGACCCTGCATCAAGAAAACGCTTATGGGATGTTATTAAGACTGCCAAAAAGGATCGTGCAATTATTCTTACTACTCATTCCATGGAAGAGGCAGAGGCCTTGTGTGATCGATTAGGAATCTTTGTTGATGGTAGCTTGCAGTGCATAGGAAATTCAAAGGAGTTGAAAGCAAGATATGGAGGAACTTATGTGTTGACAATGACAACACCTTGGGAGCATGAAAAGGAAGTGGAGAACATGGTACGGCTGCTATGTCCTAATGCTAACAAGATATACCATATTTCTGGGACTCAGAAGTTTGAGCTGCCTAAAGGGGAGGTTAGAATAGCTGATGTATTTGGAGCTGTTGATTTTGCAAAGAGAAACTTCACTGTTTCTGCATGGGGTTTAACTGACACCACAATGGAAGATGTCTTCATTAAGGTTGCTCGTGGCGACCCCCATTCTCAAAACCTGTCATAA 2841 0.4333 MFNPASFWTQANALLRKNLTYQKRDVKTNVRLVLFPVILVVLLYALQTAVDIVQSASLQDEKKTKAAACKGCVCVHDIGRHAKCPDSEKVCGPRFLGPEDANTCPVPYPPEWPPLLQLEVGDGLFSNDAARNVTMLFTGTDQFFGESLFGTMFPTELSINESDIMASLASVVLGTEFGLDLTVFVDPALSINSRILYRLQQDQCKVNSSFSFNFNEGDSKMIPDVKVNCTQASTLWRKSFSDIWDELQLEDRDDDKIGYYKLHKNPISGAFDFLNSNKNIFNVSFLIYKHDNRDKINMNRTPRSVNMISNAFLKFLLGNGTKMLFDFIGEMPKPASSDTTMIDITSLLGGLFYTWVILQLFPVILISLVYEKQHKIRMMMKMHGLGDGPYWLISYAYFLAISMAYMLCFVLMGSFFGFHFFRENNYGIQFVFYFIYVNLQIASAFLVAALFSNVKPATVTAYIVVFGTGLVAAFLFPDLLKNDLFPKKWIIVFEFYPGFALFRGLNEFAEYVSVGNSSGTLGMRWQDLNDSTNGMKQILIIMSIEWIVFLFVAYYLDQVSSSASGRSPFFFLKGFQKKTPLSSQNDNMPMQGSRALAQMDKPDVIQQREKVEELLLEPAGNHRIVCNELRKVYQGRDGNPDKVAVRGLFLAVPQGECFGMLGPNGAGKTSFISMMIGLTKPTSGTAFVQGMDIRTDMNGLYTSMGVCPQHNLLWERLTGREHLLFYGRLKNLKGSALTQAVEESLKSLNLFNGGVADKQAGKYSGGMKRRLSVAISLIGNPNVVYMDEPSTGLDPASRKRLWDVIKTAKKDRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNSKELKARYGGTYVLTMTTPWEHEKEVENMVRLLCPNANKIYHISGTQKFELPKGEVRIADVFGAVDFAKRNFTVSAWGLTDTTMEDVFIKVARGDPHSQNLS 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03303 946 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 5 939 - -
Adu01g03303 946 ProSitePatterns ABC transporters family signature. 763 777 IPR017871 GO:0005524
Adu01g03303 946 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 5 939 IPR026082 GO:0016021|GO:0055085|GO:0140359
Adu01g03303 946 SMART AAA_5 654 837 IPR003593 -
Adu01g03303 946 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 852 IPR027417 -
Adu01g03303 946 CDD ABC_subfamily_A 624 849 - -
Adu01g03303 946 Gene3D - 617 883 IPR027417 -
Adu01g03303 946 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 624 861 IPR003439 GO:0005524
Adu01g03303 946 Pfam ABC transporter 650 790 IPR003439 GO:0005524
Adu01g03303 946 Pfam ABC-2 family transporter protein 306 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03303 Adu-Chr1 105912262 105919628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03303 628 872 Calmodulin-binding Proteins AT2G36910 24.903 2.36e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03303 - - gmx:100805474 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03303 01 105912262 105919628 Adu01g03303 01 105912262 105919628 ECH