Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03300 ATGAATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTCGAAGATATTAGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTTTGATGTTGACATTGCATTTGAGTTCTACAATAGATATGCAAGGCCAAGAGGCTTTAATCCTCAGAAGAACAGGACTAGGAAGAGTCGTGCGGGTGTACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAGACCGCAAAATAATTATGGCATTGAAAAATTCAAGAAAAAACCTACACCTGAGACAAGGTGTGGCTGTAGTGCAATAATGGAGATTCGTCTAGATGCACCTAATGGTCGTTGCATGCTAAAGGACCCAAGAAAATTTAGGACAAAAGGGGGTGCAACACAGTCCAATAAACGAAAACATCGATGTGGACAATGTGGCATGGAGGGCCACAATCGAACAACTTGTCATATTCATCGAGACATTTTACAGTTAGAAGGCAGTGGAATTGACACATTTGATAATGACTTGGATGATCACATGAACATTGAAGATAATTCACTAGTATATGATGAGAATGCTTCGTACAGTAGTAATGAAGTACTGTAA 645 0.386 MNEDDTNVEPMFDYHGFDEGYNIDSLEDIRMIEFWNIRDEDVCHFHFFDVDIAFEFYNRYARPRGFNPQKNRTRKSRAGVLKLKNFVCHREGFRPQNNYGIEKFKKKPTPETRCGCSAIMEIRLDAPNGRCMLKDPRKFRTKGGATQSNKRKHRCGQCGMEGHNRTTCHIHRDILQLEGSGIDTFDNDLDDHMNIEDNSLVYDENASYSSNEVL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03300 214 Pfam FAR1 DNA-binding domain 55 130 IPR004330 -
Adu01g03300 214 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 17 135 - -
Adu01g03300 214 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03300 Adu-Chr1 105873174 105875574 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu01g03300 FAR1 1.4e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03300 - K17604 ahf:112723376 250.366