Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03299 ATGAAAAATGCGACATTCCTTAGTGAAGACAACCAGGCTCATTTTCTTGGACTAAAACGAAATCTCATTCCTCAAGCAACTCTATTTTCTTTTGTGGAGCTGATTTTAACTATCATAAAATTTCTCTCAGAGATGTTTCACTTTTATTGGATCAAGGATTCAAGACACAGACGCACTGCTTCTTTCACCCATTGTCAAATGACATGTCCATATGATACTGTTAGAGAGGGCAAGCACGTTTTTGGTGTTGCTCACATTTTTGCATCATTCAATGACACCTTTATTCATGTGACTGATTTGTCTAGAAAGAAAACCCTTGTCCGCATCACTGTCTCTTGTGAAAATGGTACCCACTAG 357 0.381 MKNATFLSEDNQAHFLGLKRNLIPQATLFSFVELILTIIKFLSEMFHFYWIKDSRHRRTASFTHCQMTCPYDTVREGKHVFGVAHIFASFNDTFIHVTDLSRKKTLVRITVSCENGTH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03299 118 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 73 110 IPR001971 GO:0003735|GO:0005840|GO:0006412
Adu01g03299 118 Pfam Ribosomal protein S11 82 113 IPR001971 GO:0003735|GO:0005840|GO:0006412
Adu01g03299 118 Gene3D Ribosomal protein S11 54 117 IPR036967 GO:0003735|GO:0005840|GO:0006412
Adu01g03299 118 PANTHER BNAA05G27530D PROTEIN 73 110 - -
Adu01g03299 118 SUPERFAMILY Translational machinery components 77 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03299 Adu-Chr1 105838294 105840486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03299 73 110 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 81.579 2.67e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03299 K02955 - adu:107467859 225.328