Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03283 ATGGGGAGGCCACCTTGCTGTGAGAAAATTGGGATCAAGAAAGGGCCTTGGACTCCTGAGGAAGACATCATCTTAGTCTCTTATATTCAAGAACATGGACCTTCCAATTGGAGATCCGTTCCCACCAATACAGGGTTGATGAGATGCAGCAAGAGCTGCAGGCTTAGATGGACTAATTATCTTCGACCAGGTATCAAAAGAGGTAACTTCACCGACCATGAGGAGAAGATGATTATCCACCTCCAAGCCCTTTTAGGGAATAGATGGGCTGCTATAGCATCCTACCTTCCACAAAGAACAGACAATGATATTAAGAATTACTGGAACACGCATCTGAAGAAGAAGCTCGCCAAGAATCAAAGCGGAGCGGCCGAAGACGGCGGCGACTACCAAGATGGAAACTCTTCAAGATCCCAGCCAAAGGGACAGTGGGAGAGAAGGCTTCAGACAGATATTCACATGGCCAAACAAGCCCTGTCTGAAGCCTTGTCCCTCAGCAAATCCTCCAATAATAACAACAATGTCTTATCTGAGTCCTCATCATCTTATGATGCTTCCAAATTTGTCACAAGAACAAGCCACGCTGCTTCTTCTTCTTCTTCTTCGTACGCCTCAAGCTATGAAAACATATCAAAATTGCTGGAGAATTGGATGAAATCCCCGAACTCGTGTGCTGAAATGACCACGAATTCGGGAAATTCATTTAGTTCTAATAACAGCGAAGCAGATCATGGCTTTGATTCTCTCTTGAGCTTCAAATCCGACGATGAAAGGAAACCAAAGTACTTGTCCTCATCAGAGGCGCAGCAACAGGTGCCTCTAACGTTGCTCGAGAAGTGGCTCTTTGATGATGGTGCTGCTCAGTGCCATGAAGATCTTATGAACATGTCATTGGAGGAAAGTACTTCAGCCTTCAGCAACTCATCTCATCGCCTCATCGGTCTCCCAGTCGCCGGTCTCTGCCTCATCATCATGACTCTCGCCAGTCCTCACCGAATCGCACTCCCGGCGACGCTATTTGGTCGCTCATCTCTCCTCCTTTGCAGCTCATCGCCGTCGGTCTCCCAGTCACCGGTCCTTGTTTCATACGATTCTCGCCAGTCCTCACTGAATCGCACTCCCAGCGGCGCTGTTTGGTCTCGCCGTCCTCTACTCATCTCTCTTCTCTCCTCCTTTGCCTCTCGGGTCTCGACGGTTCTGTGTCCGACCTCCGGCGGATTTCCGGTGCGCTCTTCTCTCTTCCTCTGGCACATCTTACCCTACTTTGAATTTGTATTTTCTACAAGTCTATCATATTCAATGCTTAAGATTTCTACTTTAGAGCTTATGTATGAAGAGATTGATACTGAGATTGCAAAAGGAAAGGTGGAACAGGTGAAAAAGAAATTATACAAGCTTTTTGAAAAATATGACAAGAATTCTCCTCCAACTGTTGAAGCACAAGGACCTAGTATTCAGTCTTCATCCATGACCCATATTCCTGAAAGTGCAAGCAAGAAGCGACTTGAGATTGTTGGCGTAACTGAGGTCTCTAATGGAAAGAATCCACTTGATACATACTTGGAGGAGCCACTTTTGTCAAAGGATTGCTTTGAATATTTAGATGTTTTGGAATGGTGGAAATTATATGAGAGTCGTTATCTGAAGTTATCAATCATGGCACGTGATTTATTGAGTATTCTAATTACTACGGTTGCATCGGAATCTGCCTTTAGTATTGGAGCTCATGTCATTAACAAATATAGAAGTCGAATGTTGCCAGAAAATGTTGAAGCTGTGATTTGTACTCGCAATTGGAATAAACGCTTTGTTGATGGTGAACGTGAAGATGTGAATCCTCAAGGTGCTAGGCGAGGCGGTGTTTCAACTTCTGGATCAGATTTAAATTTTATTGATTTGGAAGTTGATAATTGA 1914 0.4457 MGRPPCCEKIGIKKGPWTPEEDIILVSYIQEHGPSNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTDHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLAKNQSGAAEDGGDYQDGNSSRSQPKGQWERRLQTDIHMAKQALSEALSLSKSSNNNNNVLSESSSSYDASKFVTRTSHAASSSSSSYASSYENISKLLENWMKSPNSCAEMTTNSGNSFSSNNSEADHGFDSLLSFKSDDERKPKYLSSSEAQQQVPLTLLEKWLFDDGAAQCHEDLMNMSLEESTSAFSNSSHRLIGLPVAGLCLIIMTLASPHRIALPATLFGRSSLLLCSSSPSVSQSPVLVSYDSRQSSLNRTPSGAVWSRRPLLISLLSSFASRVSTVLCPTSGGFPVRSSLFLWHILPYFEFVFSTSLSYSMLKISTLELMYEEIDTEIAKGKVEQVKKKLYKLFEKYDKNSPPTVEAQGPSIQSSSMTHIPESASKKRLEIVGVTEVSNGKNPLDTYLEEPLLSKDCFEYLDVLEWWKLYESRYLKLSIMARDLLSILITTVASESAFSIGAHVINKYRSRMLPENVEAVICTRNWNKRFVDGEREDVNPQGARRGGVSTSGSDLNFIDLEVDN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03283 637 CDD SANT 69 112 IPR001005 -
Adu01g03283 637 Gene3D - 13 66 - -
Adu01g03283 637 CDD SANT 16 61 IPR001005 -
Adu01g03283 637 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 292 - -
Adu01g03283 637 SUPERFAMILY Ribonuclease H-like 443 601 IPR012337 -
Adu01g03283 637 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Adu01g03283 637 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Adu01g03283 637 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Adu01g03283 637 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 292 - -
Adu01g03283 637 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Adu01g03283 637 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Adu01g03283 637 Gene3D - 68 143 - -
Adu01g03283 637 MobiDBLite consensus disorder prediction 118 146 - -
Adu01g03283 637 SMART sant 66 114 IPR001005 -
Adu01g03283 637 SMART sant 13 63 IPR001005 -
Adu01g03283 637 Pfam hAT family C-terminal dimerisation region 517 599 IPR008906 GO:0046983
Adu01g03283 637 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Adu01g03283 637 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03283 Adu-Chr1 105529600 105534579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03283 1 305 MYB Transcription Factor Family AT5G62470 53.090 3.08e-104 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Adu01g03283 Dimer_Tnp_hAT 7.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03283 K09422 - gmx:100799402 389.808