Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03282 ATGAAAAAGCGGCAAGTGGTGATGGTGAGAAGAGATGCTTCTGCTTCGGATAATAACAACAATAATAATAATAATAATGTTGTTAAGTACGGAGAGTGTTTGAAGAATCATGCTGCCAATAGCGGTGGATATGCCGTGGATGGTTGCAGAGAGTTCATGGCCAGCGCCGCCGAGGGAACCACCGGGGCTCTTACCTGCGCCGCTTGTGGCTGCCATAGAAACTTCCATAGAAGAAAGGAACTAGCTGCACCATCCAGACAAAATATATGGGAGACATAG 279 0.4659 MKKRQVVMVRRDASASDNNNNNNNNNVVKYGECLKNHAANSGGYAVDGCREFMASAAEGTTGALTCAACGCHRNFHRRKELAAPSRQNIWET 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03282 92 MobiDBLite consensus disorder prediction 1 24 - -
Adu01g03282 92 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 18 81 - -
Adu01g03282 92 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 30 79 IPR006456 -
Adu01g03282 92 Pfam ZF-HD protein dimerisation region 28 80 IPR006456 -
Adu01g03282 92 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 29 79 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03282 Adu-Chr1 105507105 105510847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03282 1 79 Zinc finger-homeobox gene family AT3G28917 59.036 2.76e-27 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Adu01g03282 ZF-HD_dimer 2.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03282 - - adu:107468004 166.777