Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03280 ATGGCTTCTTGCAACTTCTTCAACCCTCAACAAATTGATGATCCTTTCCCACTTCCCACCCAATTTTCCGTATATGATTATGATTATTATTCTTTCTGTGGAAACACTAACGAATATCCACCACTGGGATGTTGGGCACACGAGTTTTCAATACAAGACATGGAGTGTTACCCTTCACTTCCGTTTTATGAAACTCTTTCCATCGAGCCAATTTCAACTATTAAAGACTATGACTTTTATGATATCAAGAAAGGGTTTTCTGTCTGGAACGAAGTGGATGCCGGCTTTGATTGTTCAGAAAAAGTTTCATCATCATCATTACTTTCCAACAAAAACAATGAAGAAGATAAGAGCATCCGGAGGGTTATGAATAAACGAGTTTGTAGAGAAGAGAGAAGTAGCAACAGTACGAAAATGTTATCAAGGAAGATGATATCGGAGTATTTCTACATGCCAATAACTCAAGCAGCGAAGGAACTTGATGTGGGCTTAACTCTTTTGAAGAAGAGATGCAGAGAGTTAGGGATTCGAAGGTGGCCTCATCGAAAACTTATGAGCCTTCAAACCCTCATCAATAATGTTCAGGAGCTAGGGAAGGAAGAGGGGAGAGAGAGTGAAGAGAAGCTAAGGAATGCAATTGAGATATTAGAGAAGGAAAAGAAGCTTCTGGAAGAAATGCCTGATTTGCAACTTGAAGACAATACCAAAAGACTTAGACAAGCATGCTTCAAGGCTAATTACAAGAAGAGGAAGCTCATGATGGGTTGTACTTCTTCAAATTCATCCATGGAATCTTCGTCTTCATCATCATATCATATTATTGGACATAATGCATTAAGAACTAGTCAGAATAACACAATGGGTGGTGTTGAATTTATTAGCTTTGATGATGATGAATATCAAGAACGAGACATCAAATCTGTGTTGTCTTTGCCTTCTTTGTCCCACAACATTCAAATGTGTTCTAGCTATATGTTTAATCACCCAAGTGGTGAATGA 999 0.3824 MASCNFFNPQQIDDPFPLPTQFSVYDYDYYSFCGNTNEYPPLGCWAHEFSIQDMECYPSLPFYETLSIEPISTIKDYDFYDIKKGFSVWNEVDAGFDCSEKVSSSSLLSNKNNEEDKSIRRVMNKRVCREERSSNSTKMLSRKMISEYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGRESEEKLRNAIEILEKEKKLLEEMPDLQLEDNTKRLRQACFKANYKKRKLMMGCTSSNSSMESSSSSSYHIIGHNALRTSQNNTMGGVEFISFDDDEYQERDIKSVLSLPSLSHNIQMCSSYMFNHPSGE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03280 332 Pfam RWP-RK domain 140 187 IPR003035 -
Adu01g03280 332 ProSiteProfiles RWP-RK domain profile. 123 207 IPR003035 -
Adu01g03280 332 PANTHER PROTEIN RKD4 46 268 IPR044607 GO:0003700
Adu01g03280 332 PANTHER PROTEIN RKD1-RELATED 46 268 - -
Adu01g03280 332 Coils Coil 199 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03280 Adu-Chr1 105490248 105491811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03280 126 251 AtRKD Transcription Factor Family AT1G18790 70.312 2.35e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu01g03280 RWP-RK 2.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03280 - - adu:107470725 637.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03280 01 105490248 105491811 Adu01g03280 01 105490248 105491811 ECH
Adu01g03280 01 105490248 105491811 Adu08g02898 08 45452035 45452613 PCT