Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03266 ATGGGATTTTTGGGAGTTGTGTTGATGGGGTTTATTTTATTAGTAGGAGTAGGTGTTCATGGGAATGATGCTAATGGTAATAGTTGGTTGGATGCCCATGCAACCTTCTATGGTGGGGGTGATGCCTCTGCCACAATGGGTGGAGCTTGTGGATATGGAAACCTGATTAGGCAAGGATATGGGACTGAAACAGCCGCTTTGAGCAGTGCATTGTTCAACAATGGCATGAGCTGTGGGGCATGTTTTGAGGTGAAGTGTGTGAGTGATCAAAGATGGTGCCTCCCTGGCTCAGTTGTGGTCACTGCCACCAATTTCTGTCCTCCAAACAATGCCCTCCCAAGCGATAACGGCGGTTGGTGCAACCCTCCCCTTCAACACTTTGATCTCTCTCAACCTGTCTTCCAACAAATTGCTCAATACAGAGCCGGCATAGTCTCTGTAGCTTATAGAAGGGTCCCATGCCAAAGGAAAGGAGGCATCAGATTCACCATCAATGGCCATTCTTACTTCAACTTAGTCCTAATCACCAATGTTGGGGGTGCGGGCGACGTTACCGCGGTTTCCATCAAAGGATCAAGAACCGGTTGGCAACCAATGTCCAGGAACTGGGGTCAGAACTGGCAGAGCAATTCTTACCTCAATGGACAAAGCCTCTCCTTTAAGATCACCGCCAGCGACGGCCGCACCCTTGTCTCCAGTGATGTTGCCCCTCCTGGTTGGTCCTTTGGCCAGACCTTCACAGGGCAACAATTCCCTTAG 759 0.498 MGFLGVVLMGFILLVGVGVHGNDANGNSWLDAHATFYGGGDASATMGGACGYGNLIRQGYGTETAALSSALFNNGMSCGACFEVKCVSDQRWCLPGSVVVTATNFCPPNNALPSDNGGWCNPPLQHFDLSQPVFQQIAQYRAGIVSVAYRRVPCQRKGGIRFTINGHSYFNLVLITNVGGAGDVTAVSIKGSRTGWQPMSRNWGQNWQSNSYLNGQSLSFKITASDGRTLVSSDVAPPGWSFGQTFTGQQFP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03266 252 Pfam Expansin C-terminal domain 160 237 IPR007117 -
Adu01g03266 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 47 159 IPR007112 -
Adu01g03266 252 Gene3D - 158 251 IPR036749 -
Adu01g03266 252 PANTHER EXPANSIN-A15 11 251 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin/Lol pI family signature 28 43 IPR007118 GO:0005576
Adu01g03266 252 PRINTS Expansin/Lol pI family signature 46 64 IPR007118 GO:0005576
Adu01g03266 252 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Adu01g03266 252 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Adu01g03266 252 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Adu01g03266 252 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Adu01g03266 252 SUPERFAMILY PHL pollen allergen 156 248 IPR036749 -
Adu01g03266 252 SUPERFAMILY Barwin-like endoglucanases 28 177 IPR036908 -
Adu01g03266 252 PANTHER EXPANSIN 11 251 - -
Adu01g03266 252 PRINTS Expansin signature 59 73 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin signature 86 97 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Adu01g03266 252 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Adu01g03266 252 Pfam Lytic transglycolase 64 149 IPR009009 -
Adu01g03266 252 SMART dpbb_1 64 149 IPR007112 -
Adu01g03266 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Adu01g03266 252 Gene3D - 16 155 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03266 Adu-Chr1 105344569 105346642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03266 1 251 Expansin Gene Family AT2G03090 75.697 1.49e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03266 - K20628 gmx:100816718 443.736