Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Adu01g03260 | ATGGGTCTCGTGTTTTGCTCCCTCTCCAAATTCTTATTATGCGCCATTTCTGGAGCTCTCACGCTGTGTTTTGCCGTAGCTGGAGCCCTTACCGGAGCTATAGCTGGTGCTTTAGCTGCTAAGGCAACTCACAGTGGTTTGCTGCGGGGAGCTTCATTGGGCGCTGTTGCTGGGGCTATACTCTCGGTGGAAATCTTGGAAGCTTCCCGTGCATATTGGTGCATGGAGCAAACTGGCTCACGGGGCACGTCATCTATGGCAGATTTCATAGAGGAACTTGTTCGTGCTAGGCTTATAGAGGAATCAATTTCACCTGACATTTTAACTGCTTACAATTTGCAGTTTGAACAGGTTGCCCATGGTAATAGAGGCTACGATGAGATTCACGATGTTAATAATGTAGTAGCATCCAGAGGAATGACAAAGGATTCATTGAACAAGTTACCACAACATGTCATCTTGAAGGACATGAAAGCAGAGGATACCTGCTGTGCAATATGTTTACAGGACATTGTTGTAGGAGAAACTGCAAGAAGCTTACCACGTTGTCGTCATACATTTCACTTGACATGTGTGGACAGATGGCTAGTCAAGAATCACTCTTGTCCTGTTTGCAGACGAACTGTGTAG | 630 | 0.4587 | MGLVFCSLSKFLLCAISGALTLCFAVAGALTGAIAGALAAKATHSGLLRGASLGAVAGAILSVEILEASRAYWCMEQTGSRGTSSMADFIEELVRARLIEESISPDILTAYNLQFEQVAHGNRGYDEIHDVNNVVASRGMTKDSLNKLPQHVILKDMKAEDTCCAICLQDIVVGETARSLPRCRHTFHLTCVDRWLVKNHSCPVCRRTV | 209 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Adu01g03260 | 209 | Pfam | Ring finger domain | 164 | 206 | IPR001841 | - | |
Adu01g03260 | 209 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 4 | 208 | - | - | |
Adu01g03260 | 209 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 125 | 209 | IPR013083 | - | |
Adu01g03260 | 209 | SUPERFAMILY | RING/U-box | 144 | 209 | - | - | |
Adu01g03260 | 209 | ProSiteProfiles | Zinc finger RING-type profile. | 164 | 206 | IPR001841 | - | |
Adu01g03260 | 209 | SMART | ring_2 | 164 | 205 | IPR001841 | - | |
Adu01g03260 | 209 | PANTHER | NEP1-INTERACTING PROTEIN-LIKE 2 | 4 | 208 | IPR044523 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Adu01g03260 | Adu-Chr1 | 105207454 | 105209929 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Adu01g03260 | 7 | 209 | C3H Transcription Factor Family | AT1G74410 | 51.471 | 5.62e-65 | 198 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Adu01g03260 | - | - | gmx:100800105 | 316.62 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Adu01g03260 | 01 | 105207454 | 105209929 | Adu01g03260 | 01 | 105207454 | 105209929 | ECH |