Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03256 ATGGAGAGGGAGGAGCTGAATTTGAACAAAGAGAGTAATAACAACGGTGTTGGAGGTAATAACAGTAAGAGTGGCGGTGATGGCTTCATTGACAGAAGCAAAGTTAGGATTTTGTTGTGTGATAACGATTCCAAGAGTTCCGAAGAGGTTTTTACTCTTCTAATTCGATGCTCTTATCAAGTTGTTTCTGTAAAGTCAGCAAGGCAAGTAATTGACGCACTGAATGCAGAGCGACAATATATAGACATCATACTAGCTGAAGTCGACCTTCCAATAAAAAAGGGCATGAAGATGCTTAAGTACATAGCACGCGACAAAGAATTGCGCCGAATTCCTGTTATAATGATGTCTGCACAAGATGAGGTATCCATTGTTGTTAAGTGCTTGAAACTTGGAGCAGCAGACTATCTAGTTAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGCTTGGACTTGTAGAGAACAACATCTTGAATTATGACTTCGACCTGGTAGTGTCTGACCCGAGCGATGCAAATACAAACAGTACCACCTTATTTTCTGATGACACAGATGATAAGTCCAAAAGAAGCAGTAATCCAGAGGCAGGAATATCTATCCAACAGCAAGAGGCTACTGTTGCCATGGATATTGTTGTTGAGGAGCATCCTAATTCTTTGGTGTCGCCTGATGTGCCTGGAATTAGTGATCGCCGAACAGGTGCTCAGGGGCAGCATCAATCATGCAACAATATTACTGAGGGTTATTTTTCATCTGCTCCAAAGAAGAGTGAACTAAGGATAGGAGAATCATCAGCCTTCTTCACTTATGTCAAAGCAACAACAACAATAAGGAGCAACATTGAAGAGATTGTTCATCTTGACAAGAATGCTACTAAACAAGTGAGAATGGAAGACATGGATCAAGCATGTGCTCAAGAGAAGGGTAACCTTCAAAGACATGAGAATGGAGAGACACTTGAAAGCCATTCACAAGAGGACTTACCCAGCAGCAATAGTATACCTGATTCTTTTTCTATTGAGAGATCTTGCACTCCTCCTGCATCAATGGAAGTTTCACAGCAAAAGCATTACAAGGAAGAGCATCGTCAGGGTGTGGTGCATCCAAGAAATGGAAGCCATGGTTCCGAGCCTGATGCATCTAGCATGAATGCTCACCATGCTTATCCATATTATATGTCAGGAGTTGTTAATCATGTTATGATGCCATCATCAGCACAACTGTATCAAAAGAATATGCAGGAGCTACAGAATCATACTAGTTCGTCTATGATTGCACAATACAATCATCTTCCCCACTGCCCTCCTCATCCAAACGGGATGACGTCCTTTCCATATTATCCAATGGGTATATGCTTACAGCCTGGTCAGATTCCTGCGAATCATTCATGGCAACAATTAGGAGGTTCGAGTTCATCAGAGGTGAAATTAAGCAAAGTTGATAGAAGAGAAGCGGCGTTGATGAAGTTTAGACAGAAAAGGAAAGAACGTTGTTTTGATAAGAAAATTAGGTATGTCAATAGGAAACGACTGGCTGAAAGGCGGCCCCGTGTTAGGGGACAATTTGTCAGAAAGTTGAATGGTGTCAATGTGGATCTCAATGGACACCCTGCCTCCACTGATTATGATGACGAAGATGACGATGAGGAGGAAGAAGACAACCACGTAGCAAATGATTCCTCTCCTGAGGATGCATGA 1728 0.4207 MEREELNLNKESNNNGVGGNNSKSGGDGFIDRSKVRILLCDNDSKSSEEVFTLLIRCSYQVVSVKSARQVIDALNAERQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYDFDLVVSDPSDANTNSTTLFSDDTDDKSKRSSNPEAGISIQQQEATVAMDIVVEEHPNSLVSPDVPGISDRRTGAQGQHQSCNNITEGYFSSAPKKSELRIGESSAFFTYVKATTTIRSNIEEIVHLDKNATKQVRMEDMDQACAQEKGNLQRHENGETLESHSQEDLPSSNSIPDSFSIERSCTPPASMEVSQQKHYKEEHRQGVVHPRNGSHGSEPDASSMNAHHAYPYYMSGVVNHVMMPSSAQLYQKNMQELQNHTSSSMIAQYNHLPHCPPHPNGMTSFPYYPMGICLQPGQIPANHSWQQLGGSSSSEVKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGHPASTDYDDEDDDEEEEDNHVANDSSPEDA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03256 575 Pfam Response regulator receiver domain 37 148 IPR001789 GO:0000160
Adu01g03256 575 Gene3D - 35 229 - -
Adu01g03256 575 SMART REC_2 35 150 IPR001789 GO:0000160
Adu01g03256 575 MobiDBLite consensus disorder prediction 551 567 - -
Adu01g03256 575 MobiDBLite consensus disorder prediction 1 25 - -
Adu01g03256 575 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 558 IPR045279 GO:0009736
Adu01g03256 575 ProSiteProfiles CCT domain profile. 493 535 IPR010402 GO:0005515
Adu01g03256 575 ProSiteProfiles Response regulatory domain profile. 36 154 IPR001789 GO:0000160
Adu01g03256 575 MobiDBLite consensus disorder prediction 327 392 - -
Adu01g03256 575 MobiDBLite consensus disorder prediction 228 252 - -
Adu01g03256 575 MobiDBLite consensus disorder prediction 364 378 - -
Adu01g03256 575 MobiDBLite consensus disorder prediction 538 575 - -
Adu01g03256 575 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 4 558 - -
Adu01g03256 575 MobiDBLite consensus disorder prediction 185 209 - -
Adu01g03256 575 Pfam CCT motif 493 535 IPR010402 GO:0005515
Adu01g03256 575 SUPERFAMILY CheY-like 33 161 IPR011006 -
Adu01g03256 575 MobiDBLite consensus disorder prediction 333 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03256 Adu-Chr1 105157250 105162164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03256 20 574 Response Regulator Gene Family AT5G61380 52.848 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Adu01g03256 Response_reg 1.2e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03256 K12127 - gmx:100786522 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03256 01 105157250 105162164 Adu01g03256 01 105157250 105162164 ECH