Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03255 ATGTCTCCCCCATCCGTCGATCAAGGTAACGCCGATCCAGAGGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGTAGAAGAGGAGGTAGAGGAGGAAGAAGAAGAGGAAGAGGAGGAAGAAGAAGAAGAAGATGTACAGGAAGAGGAAGAGGAAGAGGAGGAAGAAGAGGTAGAGGTAGAGGTAGAAGAAGAGGTAGAAGAAGGAGAAGAAGAGGAGGAGGTAGAGGAAGAAGAAGAGGAGCCAGAAAACGACGGTGATGATAAAGGCTACGCCTCAGATTCTGTATCCGATGCCGACAACGATCGCATAGATTCATGCCAACAAATGGAATCTGAAGTACAAGAGAGGAACTTGAGGCCAACTTATACTATGGCGGAAAACCCTATAGTAATGTCTTCTCCTAGTATGCCATCCAATGAAGAGAATCATGCCATTCTCAAAGCATCTAGTCCTTCATCTGAGGAACTAAGTTTTAAAAAGGAAGACGTTCACGCAACACGCGAAATTTCAAGTCATCCCAAATCAGTAAATGATTTTGCTTCCGCTAAAGATGGCAAAAGTCAAGTTTTAGACTCCAGCCAACAGATGAAATCTGAGGGACTAGGGGGGGACTTGAGGCCAGCTTCTACCGTGGCAGAAAACCCTGTAATAAAGCCTTCTCCTAGTCTGTGTTCCAAAGAAGAGAATTGTGTCATTCTCAAAGCATGTGTTGTTTCTGCTCCTTCATCTGACACGCTAGCTTTGAAAAAGGAACAAGTTTTCCCAACTCCAAAAATTTCAAATTCTTGTCATCCCAAATCAGTTAAAGACTTGGCCCCAGCAGATGATGGCAAAAATCAAGTTTTAGATGTTGATGGTGCAAATACTGGAATTGTTCAACTAACATACAATGTTGGAGGGTGCAATGAACCAAGTAACGATAGCAAAGCTGATTTAGGTGGTGTTAAGGATATGGATTCTGGGGCCACCAAGTTGTCTAGTAACATTGGAAAAGACATCGCTATTGGCCTTCCTCAAACGGATGCCTTTGTTGGGAGTGCCAATGGCAGTCAGAATTCCTTGAAAAGAACTGTACCATTGGAAGTAGAATCAAAGGATGATGTAAAACAAATCAAATCAAGGACTATAGTTCCGTCTTCGAATACTGAGATGAAGGATGGAAACAAACACCAGGGAATTATATGTGCCTTTTTTGCTAAAGGGTGGTGCATCAGAGGTAATTCCTGTAGCTTTCTTCATATAAAAGATTCTGCAAAGGATACTGGCCAGGAGACTCAGGGGGACTTGGATAAAGCAAAGCAGAAGAGAGAACTGGAATTAGAAGAAGGTACCAGGGACAATATCAAAAGAACCAGGACGAATGACCAAGAAGAAATCTCAGACTGGCATCCTTGTCAAGAAAAAAATAAGTACCAGTTGAGGGACATCTTGTTTCCAGAGAGTAGATTTACAAGCAAATATTTCAACACAAATCTCTCATCCTATTCAAATCATGCAGCGGGATTGAGTATAGCTCAAAACCATCATATGTACAATGGATATACTTCTGCAGTTTTGAGTCGTTCACCTAAGTTGAGCTTTGTTACTCAGAAACTTTTGAATAGTGACAAAGAATATAATGCCTCTAGATCTGCTTTCTCTGGCTCAGAGCGGGAGGAGTTGCCATCGGTTGGTTCATCTAGGATTCCAATACACTCTGCCGCATATATATCAAAAATATGTTCTTATGATTGGGAACCTTCTGTGCCATTTCGACCATCATTTTTCATTACGTCAATGAATGTATCATCTCTGGGAGACCTGTATGACCCTCTTCGAGATAGCATTGAGATACCAAATATAGGAGATGGGTCTTTGAAAGCTTCCCTCTTAATTCATGGATCATCCATCCAGGCTTCATCACAGGTGCTGAAATATGGCGATTCAGCTGTAGTTGGGAAACATATGTCTGATTTTAATGATGAGAAAAGTTCCGTATCTTCTCATAATAGATTTGGTGAGAACCAACCAAACAAAAATTTGGTTCCTCATGAAAAAGATTGTCATGCAACTGAAATGGAAATAACATCAGGGACTTGTATGAACTACCCCAATGGTAAAATCGGCATGGGGAAAGATGTTACAAAATCAGAGAGAGAATGGACTGAACATGATGCCAAACATCATGGTGAAGGATCAGCGCACAAGAAGAGAGTAGATAGGGATAAGAAAATTAATGATACAGATGCCGATTTGCAGACTGACTGCAGTGTGCAGAAGGATTCCAAAGCAATGAGACACTTTCGTGCAGCTCTTGTTGACTTGGTGAAAGAGTTGTTAAAACCATCTTGGCACGAGGGCCGTCTTAGTAAGGATGCACATATCTTGATAGTTAAAAGATCAGTTGACAAGATACTCAGCACCTTAGAGCCTCAGCAAATTCCAACCACTATAGATGCTACTAAGCAATATGTTTCTTTGTATCGTGGAAAAATTGCAAAGATGGTCAATGGATATATCAACAAATTTGGCAAGTCTTGA 2520 0.4111 MSPPSVDQGNADPEEEEEEEVEEEVEEEVEEEEEEEEEEEEEEDVQEEEEEEEEEEVEVEVEEEVEEGEEEEEVEEEEEEPENDGDDKGYASDSVSDADNDRIDSCQQMESEVQERNLRPTYTMAENPIVMSSPSMPSNEENHAILKASSPSSEELSFKKEDVHATREISSHPKSVNDFASAKDGKSQVLDSSQQMKSEGLGGDLRPASTVAENPVIKPSPSLCSKEENCVILKACVVSAPSSDTLALKKEQVFPTPKISNSCHPKSVKDLAPADDGKNQVLDVDGANTGIVQLTYNVGGCNEPSNDSKADLGGVKDMDSGATKLSSNIGKDIAIGLPQTDAFVGSANGSQNSLKRTVPLEVESKDDVKQIKSRTIVPSSNTEMKDGNKHQGIICAFFAKGWCIRGNSCSFLHIKDSAKDTGQETQGDLDKAKQKRELELEEGTRDNIKRTRTNDQEEISDWHPCQEKNKYQLRDILFPESRFTSKYFNTNLSSYSNHAAGLSIAQNHHMYNGYTSAVLSRSPKLSFVTQKLLNSDKEYNASRSAFSGSEREELPSVGSSRIPIHSAAYISKICSYDWEPSVPFRPSFFITSMNVSSLGDLYDPLRDSIEIPNIGDGSLKASLLIHGSSIQASSQVLKYGDSAVVGKHMSDFNDEKSSVSSHNRFGENQPNKNLVPHEKDCHATEMEITSGTCMNYPNGKIGMGKDVTKSEREWTEHDAKHHGEGSAHKKRVDRDKKINDTDADLQTDCSVQKDSKAMRHFRAALVDLVKELLKPSWHEGRLSKDAHILIVKRSVDKILSTLEPQQIPTTIDATKQYVSLYRGKIAKMVNGYINKFGKS 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03255 839 MobiDBLite consensus disorder prediction 711 739 - -
Adu01g03255 839 MobiDBLite consensus disorder prediction 154 171 - -
Adu01g03255 839 MobiDBLite consensus disorder prediction 148 208 - -
Adu01g03255 839 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 26 839 - -
Adu01g03255 839 MobiDBLite consensus disorder prediction 10 86 - -
Adu01g03255 839 Coils Coil 11 80 - -
Adu01g03255 839 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 26 839 - -
Adu01g03255 839 ProSiteProfiles Zinc finger C3H1-type profile. 394 416 IPR000571 GO:0046872
Adu01g03255 839 MobiDBLite consensus disorder prediction 1 122 - -
Adu01g03255 839 SUPERFAMILY CCCH zinc finger 390 413 IPR036855 GO:0046872
Adu01g03255 839 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 394 413 IPR000571 GO:0046872
Adu01g03255 839 MobiDBLite consensus disorder prediction 653 676 - -
Adu01g03255 839 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03255 Adu-Chr1 105140872 105145178 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Adu01g03255 zf-CCCH 5.2e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03255 - - adu:107468208 1525.76