Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03241 ATGGCTTCTTGCAATTACTTCTTCAACCCTCAACAAATAGATGAATATCCTTTCCCTCTTCCCATTCAATGTTCCTTATATGATTATGATTATTACTATTATTCCAGTGAAAACACTAACGAATATCCACCACTGGGATGTTGGGCACACGAGTTTTCAATACAAGACATGGAGTGTTACCCTTCACTTCCTTTTTATGAAACTCTCTCCATCGAACCAATTTCAACTATTAAAGACTATGACTTTTATGATATTAAGGAAGGGTTTTCTGTCTGGAACGAAGTGGATGCCGGCTTTGATTGTTCAGAAAAAGTTTCATCATCATCATCACTTTCCAACAACAACAACAATGAAGAAAATAAGAGCATCAGGAGGGTCATTAATAAACGAGTTTGTAGAGAAGAGAGAAGTAGCAACAGTACGAAAATGTTATCAAGGAAGATGATATCGGATTATTTCTACATGCCGATAACTCAAGCAGCGAAGGAACTTGATGTGGGCTTAACACTTTTGAAGAAGAGATGCAGAGAGTTAGGGATTCGAAGGTGGCCTCATCGGAAACTTATGAGTCTTCAAACCCTCATCAATAATGTTCAGGAGCTAGGGAAGGAAGAGGGGAGAGAGAGTGAAGAGAAGCTAAGGAGTGCAATTGAGATATTAGAGAAGGAAAAGAAGCTTCTGGAAGAAATGCCTGATTTGCAACTTGAAGACAATACCAAAAGACTTAGACAAGCATGTTTCAAGGCCAACTACAAGAAGAGGAAGCTAATAATGGGTAGTAGTTCTTCAAATTCATCCATGGAATCTTCTTCATCATATAACATTATTGGACATAATGCAACAAGAATAACTAGTAGTAAGGGAGACACGATGGATAGTGTTGGATTTATTAGCTTTGAGGATGAAGAAGATCAAGAACGTGACATCAAATATGCGTTGTCTTTGCCTCCTTTGTCCCATAACATTCAAATGGTCTAG 978 0.3804 MASCNYFFNPQQIDEYPFPLPIQCSLYDYDYYYYSSENTNEYPPLGCWAHEFSIQDMECYPSLPFYETLSIEPISTIKDYDFYDIKEGFSVWNEVDAGFDCSEKVSSSSSLSNNNNNEENKSIRRVINKRVCREERSSNSTKMLSRKMISDYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGRESEEKLRSAIEILEKEKKLLEEMPDLQLEDNTKRLRQACFKANYKKRKLIMGSSSSNSSMESSSSYNIIGHNATRITSSKGDTMDSVGFISFEDEEDQERDIKYALSLPPLSHNIQMV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03241 325 Pfam RWP-RK domain 144 191 IPR003035 -
Adu01g03241 325 PANTHER PROTEIN RKD4 42 270 IPR044607 GO:0003700
Adu01g03241 325 ProSiteProfiles RWP-RK domain profile. 127 211 IPR003035 -
Adu01g03241 325 PANTHER PROTEIN RKD1-RELATED 42 270 - -
Adu01g03241 325 Coils Coil 203 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03241 Adu-Chr1 104927712 104929361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03241 130 255 AtRKD Transcription Factor Family AT1G18790 69.531 7.64e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Adu01g03241 RWP-RK 2.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03241 - - adu:107470725 492.656