Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03198 ATGAGTTCAAGCAAAAGCAGCTATCAAGCGAAGCAAGAAGACGACGGCGGTGGAGGCGGAGGCGGTGGCGGCACTAGCTCTTCAAGACAGTGGACAGCGTTCAGGAATCCAAGAATCGTTCGAGTTTCGCGGTCTTTGGGAGGGAAAGACAGGCACAGCAAGGTTTGCACCATTAGAGGTCTAAGGGACCGGAGAATTCGGCTCTCCGTTCCCACCGCCATTCAGTTGTATGATCTCCAAGATCGACTCGGCCTGGGTCAACCCAGCAAGGTCATTGATTGGTTGCTTCAAGCCACCAAACTCGACATTGATAAGCTACCGCCCCTTCAAATCCCTCCCGGTTTCGCTCAATTTCACCATCAGCAAACCCTAATTCCCCTTTCTCATCATCATCAATTCTCCCTTGGCGGCTTCTATGATGCCAATTCCTCAAGGTTTTGGGATATGGATTCTTCTTCAATTAGCCTAAAAGGTAAAGAATCTGATACTATTACTCATCCAGCTGGTGTGATATCTGAGAAAGGAAAATGGATCAAAACAAATCAACATGTTGATGAAAATCAAGACGGATTGTTGTTGCTTAACAATGCTATGGGATATAATAATTCTCCTTCAGGATTAACTTTATCATCATCCTCCTCATCTTCACAATTTGGAAGCCATGCATTATTGTTTCCTTCACAACAATTATTAGATCCTCAATTTTCATCTTCTTCTGCAACAACACCATCAACTTTCACTCCCTATTATGCTCCATTTGTAGCTAATTCGTCATCATCAACAACAACAACAATGGTGGAAAATAATAGTGATGCATTAAGGCAATTCAACCATATTCAGATCTTGAGTTCTCAAGTGATGCCTCATCCCTTTATTCCATCATCTTCTCTTTTTCACTCAATCAATAGTAATAATAATAATAATGATAATAACTCAGCTGCTGCTACTATCAGGCGTATTCCAATGCCATTTAGTTCTAAGCTTCTTGATTCAGATAACAACAACAATGAAAGTAACCAGGAAGATCATAAAGGTACGTAG 1041 0.4169 MSSSKSSYQAKQEDDGGGGGGGGGTSSSRQWTAFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLGQPSKVIDWLLQATKLDIDKLPPLQIPPGFAQFHHQQTLIPLSHHHQFSLGGFYDANSSRFWDMDSSSISLKGKESDTITHPAGVISEKGKWIKTNQHVDENQDGLLLLNNAMGYNNSPSGLTLSSSSSSSQFGSHALLFPSQQLLDPQFSSSSATTPSTFTPYYAPFVANSSSSTTTTMVENNSDALRQFNHIQILSSQVMPHPFIPSSSLFHSINSNNNNNDNNSAAATIRRIPMPFSSKLLDSDNNNNESNQEDHKGT 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03198 346 ProSiteProfiles TCP domain profile. 48 106 IPR017887 -
Adu01g03198 346 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 344 IPR005333 GO:0003700
Adu01g03198 346 MobiDBLite consensus disorder prediction 1 30 - -
Adu01g03198 346 PANTHER TRANSCRIPTION FACTOR TCP17 2 344 - -
Adu01g03198 346 MobiDBLite consensus disorder prediction 324 346 - -
Adu01g03198 346 Pfam TCP family transcription factor 48 140 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03198 Adu-Chr1 104057794 104059652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03198 31 191 TCP Transcription Factor Family AT5G60970 54.545 1.18e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu01g03198 TCP 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03198 - - cam:101498052 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03198 01 104057794 104059652 Adu10g02194 10 95136936 95138925 PCT