Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03197 ATGCAATTGCTGGAAGGCACACTTCTCAGAGGTATTTACATAATTAACCTTGGACAAGACATGGGAGAGGCTCTATCTTGCTGTGCGAATGCAATTGCTGGAAGGCACACTCCTGGAACATTCACTAATCAAATGCAGACATCCAATAACGAGCCTCGTCTACTCATTCTGACTGATCCAAGGACTGATCATCAGCCCATGAAGGAAGGTGTTCTTGGAATTGCCTTGTGCGACACGGATTCTACAATGCGCTATCTTGATGTTGGCACTCCTGCCAATAACAAGGGGAAGCACAGTATTGGTTGTCTGTTTTGGTTATTAAGTGGGACGTGA 333 0.4535 MQLLEGTLLRGIYIINLGQDMGEALSCCANAIAGRHTPGTFTNQMQTSNNEPRLLILTDPRTDHQPMKEGVLGIALCDTDSTMRYLDVGTPANNKGKHSIGCLFWLLSGT 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03197 110 SUPERFAMILY Ribosomal protein S2 11 108 IPR023591 -
Adu01g03197 110 PANTHER 40S RIBOSOMAL PROTEIN SA 28 107 - -
Adu01g03197 110 CDD RPS2 23 108 IPR001865 GO:0003735|GO:0005840|GO:0006412
Adu01g03197 110 Gene3D - 19 110 - -
Adu01g03197 110 PANTHER 40S RIBOSOMAL PROTEIN SA 28 107 IPR005707 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03197 Adu-Chr1 104035143 104036307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03197 29 108 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 82.143 1.37e-46 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03197 K02998 - gmx:100818292 145.976