Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03189 ATGAAGCCTCTTTGGTTACCTACCGGTACCAGTGGATCTGTTGTAGCAACCTTACTCCTGTTACTGTTCTCTTGCACCACATTCACTTCCACAGAAGCTTATGATGCACTTGATCCAACTGCCAATATAACAATCAAATGGGATGTCATAACCTGGACTGGAGATGGCTATATTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCATATCCAGGCGCCGGGATGGACCTTAGGGTGGACATGGGCGAAAAGGGAAGTAATTTGGAACATGCTTGGAGGCCAAACCACAGAACAAGGGGATTGTTCAAGGTTCAAAGGGAGCATCCCACATTGCTGCAAGAAAGATCCAACTGTAGTGGATTTACTGCCAGGAGCACCTTACAATCAGCAGGTAGCAAATTGCTGCAAAGGCGGCGTCTTGAATGCGTGGGCTCAGGACCCTGAAACTGCAGTTGCTTCGTTCCAACTCATTGTCGGTTCGGCTGGAACAACTAACAAAACTGTTAGAGTGCCAAAAAATTTCACCTTGAGAGTGCCCGGTCCAGGTTATACTTGTGGCCCTGCAAAGATTGTGAGGCCAACAAAATTTAGCACCAATGACAAGAGGAGAACCACTCAAGCCATGATGACTTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAAAAGACTCCAACTTGCTGTGTTTCTCTCTCATCATTCTATAATAATACAATAGTCAATTGCCCAACTTGTACCTGTGGCTGTCAAAACAAAACAGAACCTGGAAGCTGTGTAGATCCAAAGTCTCCGCATTTAGCTTCAGTCGTTTCACCACCAAGCAGAGCTTTGAATCCACCTCTAGTTCAGTGTACAAGCCATATGTGTCCGATTCGAGTGCACTGGCACGTCAAGCTCCAATACAAAGAGTACTGGAGGATCAAGATCACAGTCACAAATTTCAATTACAGAATGAACTATTCACAATGGAACCTTGTTGTTCAGCATCCCAATTTTGACAATGTGACACAGGTTTTCAGCTTTAACTACAAGCCACTGACACCTTATGAGGGCTTAAATGATACAGGTATGCTGTGGGGTGTGAAGTTCTACAATGATTTGTTGGTTTCAGCTGGAGCAGTTGGGAATGTGCAATCAGAACTGTTATTTAGGAAAGACAAATCAAGCTTCACATTTGATAAAGGATGGGCATTCCCAAGAAGGATCTATTTCAATGGAGACAACTGTGTCATGCCACCTCCAGATGCATATCCTTGGCTACCAAATGCAAGTTCAACACTAGTTCTCTCTTTGCTAAGTTCTCTCACTCGGATTCTGGCTTCTTTTCTTGTCTTATCATTTACATGTTAA 1359 0.4364 MKPLWLPTGTSGSVVATLLLLLFSCTTFTSTEAYDALDPTANITIKWDVITWTGDGYIAVVTMYNFQQYRHIQAPGWTLGWTWAKREVIWNMLGGQTTEQGDCSRFKGSIPHCCKKDPTVVDLLPGAPYNQQVANCCKGGVLNAWAQDPETAVASFQLIVGSAGTTNKTVRVPKNFTLRVPGPGYTCGPAKIVRPTKFSTNDKRRTTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCTCGCQNKTEPGSCVDPKSPHLASVVSPPSRALNPPLVQCTSHMCPIRVHWHVKLQYKEYWRIKITVTNFNYRMNYSQWNLVVQHPNFDNVTQVFSFNYKPLTPYEGLNDTGMLWGVKFYNDLLVSAGAVGNVQSELLFRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSTLVLSLLSSLTRILASFLVLSFTC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03189 452 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Adu01g03189 452 PANTHER PROTEIN COBRA 11 448 IPR006918 GO:0010215|GO:0031225
Adu01g03189 452 PANTHER COBRA-LIKE PROTEIN 11 448 - -
Adu01g03189 452 Pfam COBRA-like protein 57 220 IPR006918 GO:0010215|GO:0031225
Adu01g03189 452 PIRSF COBRA 10 452 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03189 Adu-Chr1 103871166 103874897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03189 19 446 COBRA Gene Family AT3G02210 75.581 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03189 - - gmx:100811581 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03189 01 103871166 103874897 Adu01g03189 01 103871166 103874897 ECH
Adu01g03189 01 103871166 103874897 Adu10g02187 10 94993097 94996199 PCT