Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03155 ATGGGGTGTTCATTTTCTGGTTTGAACGCACTTTACGATTCCGTTAACGGAGGCGGAGATGTTTGGATCAACGAGAACCGGTTCCGTATCGTCAGGCAGCTCGGTGAAGGTGGAAACGCCTATGTCTTCCTCGTCAAGGACGTTCCCGCCGACAACGTCTCCGGCGGTTTCTCCTCCAAGCTCAAACAGTCCTCTCACATTTCCGAGGACGGAACATATGCTATGAAAAAGGTCCTCATCAAGAGCAAAGAGCAGCTGGAGTTGGTCAGGGAGGAGATCCGTGTTTCCTCACTGTTCAACCACCCAAATCTGCTCCCGCTTCTCGATCATGCAATCATTTCTGTCAAGCCTACTCCACAAAAATCTTGGAACCACGAGGCATACTTGTTATTTCCACTTCATTTGGATGGAACACTGCTAGATAATACCAAGACAATGCAAGCCAGGAAGGAATCCTTTCCTACCTCGGATGTTCTTCAAATCTTTCGACAGCTTTGTGCAGGACTCAAGCATATGCATGGTTTAGATACTCCATATGCTCATAATGATGTCAAACCTGGTAATGTTCTCATAACACATAGAAAAGGACAATCGCCTCTTGCCATACTCATGGATTTTGGCAGTGCTCGTCCTGCCAGGAAGCACATTGGTTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCAGCTGAACACTGTTCTGCCCCTTTCCAAGCTCCGGAGCTGTGGGAATGCCCAAGCCAAGGTAAGCCCCAGATTGCTGTGCGGCCCCGGATAGATGACATTGTTATTCATGTTGATAAGTTGATTGCAAAGTTCTCTGGTTGA 828 0.4819 MGCSFSGLNALYDSVNGGGDVWINENRFRIVRQLGEGGNAYVFLVKDVPADNVSGGFSSKLKQSSHISEDGTYAMKKVLIKSKEQLELVREEIRVSSLFNHPNLLPLLDHAIISVKPTPQKSWNHEAYLLFPLHLDGTLLDNTKTMQARKESFPTSDVLQIFRQLCAGLKHMHGLDTPYAHNDVKPGNVLITHRKGQSPLAILMDFGSARPARKHIGSRSEALQLQEWAAEHCSAPFQAPELWECPSQGKPQIAVRPRIDDIVIHVDKLIAKFSG 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03155 275 SUPERFAMILY Protein kinase-like (PK-like) 21 244 IPR011009 -
Adu01g03155 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 249 - -
Adu01g03155 275 Pfam Protein kinase domain 56 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03155 275 PANTHER PHOSPHORYLASE KINASE, GAMMA CATALYTIC SUBUNIT-RELATED 250 274 - -
Adu01g03155 275 ProSiteProfiles Protein kinase domain profile. 28 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03155 275 SMART serkin_6 28 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu01g03155 275 Gene3D Transferase(Phosphotransferase) domain 1 135 262 - -
Adu01g03155 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 250 274 - -
Adu01g03155 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Adu01g03155 275 Gene3D Phosphorylase Kinase; domain 1 13 132 - -
Adu01g03155 275 PANTHER PHOSPHORYLASE KINASE, GAMMA CATALYTIC SUBUNIT-RELATED 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03155 Adu-Chr1 103347947 103351535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03155 19 194 MAP Kinase Kinase Gene Family AT4G29810 25.789 1.40e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Adu01g03155 Pkinase 6.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03155 K08856 - gmx:100803659 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03155 01 103347947 103351535 Adu01g03155 01 103347947 103351535 ECH