Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03152 ATGGCCCAAGACCCAGCTTCTGGTGCTGATTCGCCTCGTACGAGGCGTTATGGCCTACTACGGGACCAAGTTCAACTGGTTAAAAGAAAGGATTGTGATCGCTATGAAATTGTTCCAATCCAGGATTCCTTGTCGTTTGAGAAAGGATTTTTCATCGTGATTCGTGCATGCCAGTTGTTGGCTCAAAAGAATGATGGGATCATATTAGTAGGACTTGCAGGTCCCTCTGGAGCAGGCAAAACTGTTTTCACTGAGAAGGTCAACAATTTTATGCCAAGCTTAGCCGTCATCACAATGGACAATTATAACGATTCTAGTCGAATCATAGATGGCAATTTTGATGACCCTCGTTTGACGGATTATGATACTTTGCTTGAAAATATAATGGGTCTTAAAGAAAGGAAAGCAGTACAGGTTCCAATATATGATTTCAAGACTAGTTCTCGCGTAGGTTACAGGACTGTTGAAGTCCCTAGTTCCCGCATTGTCATCATAGAAGGCATTTATGCCTTAAGTGAAAAATTACGACCTTTGCTTGATCTTCGAGTTTCGGTCACTGGGGGAGTTCACTTTGACCTTGTCAAGCGTGTGCTGCGTGACATTCAACGTGCTGGTCAAGAGCCTGAAGAAATCATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTTTATTGAGCCTGATCTTCAAACAGCACATATAAAAATTATTAACAAGTTTAATCCGTTCTCTGGATTCCAGAATCCCACCTACATATTGAAGTCACTAAAAGCTGTGACAGAGGATCAAATCAAGTCAGTTATTGCTGCTGAGCATACTGAGACGAGAGAGGAAACATATGACATATATCTTCTACCACCAGGGGAAGACCCTGAAGCATGTCAATCATACCTGAGGATGAGAAACCGCGATGGGAAGTATAATCTCATGTTTGAGGAATGGGTCACAGATATTCCATTCATAATATCACCCAGAATAACATTTGAGGTCAGCGTGCGCCTTCTAGGAGGGTTGATGGCATTGGGTTACACAATTGCAGCTATACTAAAACGAAGCAGCCATGTCTTTTCCGATGATAAGGTGACTGTAAAAACTGATTGGCTCGAACAAGTTAACCGCCTATATGTTCAGGTTCAAGGGAAAGATAGAAACTATGTTAAACTTGTTGCAGAGAAACTGGGATTGGATGGTTCATATGTTCCTCGCACTTACATAGAACAAATTCAGCTAGAAAAGCTTGTTAATGATGTAATGGCACTGCCAGAGGATCTTAAGACAAAGCTCAGCATTGATGATGATATGGTTTCAAGCCCTAAAGAAGCCCTTTCTCGAGCTTCTGCTGATAGGAGAATGAAGTATCTAAATCGTGGTATTTCTCACTCATTTTCAACTCAGAGAGAGAAGCATCTATCTAAGTTGACTAGACTAGCTATAAATAACAGAAGATTTGATGGGAGAGCTCTTGAATCACCTGCGCCAGTTGCCAACCAAGGAGTCATCACTCAGCTTTCTGAACAAATATCCACATTAACTGAAAGAATGGATGAGTTCACGAATCGTATTGAGGAGCTAAATTCAAAGTTTGCATCCAGAAAAGCCAGTCAACAGAACATAGCCTTGCCTGCTGAAGCCTGCAATGGCTCAGGTCACACTTCTCTTTTTGTAACTGGATTGGGAAATGGTTCATTGACAAGATCATTGCTGCCTCATTCTTCATCGTCTTCCCAATTAGCTAGGGATGCTCCCCTGATGGAAGAGGTTTTGCTTGTTGCACGAGGACAGCGGCAAATTATACATCAACTAGACTCTCTAAGTACTCTGTTGCACGAATACTGCGGTGAAAGGTCGCGACACGGAAGGACAGACCAGACAAACAGAATGCACGAAGTGGAAACCATTGCCATCCCCCTGGTTCTGACTTTGGCCATTGGTGCTGTTGGTGTCTTCTTGTTCAGGGGTTTCACATCCCAAAAATAA 1983 0.4231 MAQDPASGADSPRTRRYGLLRDQVQLVKRKDCDRYEIVPIQDSLSFEKGFFIVIRACQLLAQKNDGIILVGLAGPSGAGKTVFTEKVNNFMPSLAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIMGLKERKAVQVPIYDFKTSSRVGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSLKAVTEDQIKSVIAAEHTETREETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDIPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFSDDKVTVKTDWLEQVNRLYVQVQGKDRNYVKLVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPEDLKTKLSIDDDMVSSPKEALSRASADRRMKYLNRGISHSFSTQREKHLSKLTRLAINNRRFDGRALESPAPVANQGVITQLSEQISTLTERMDEFTNRIEELNSKFASRKASQQNIALPAEACNGSGHTSLFVTGLGNGSLTRSLLPHSSSSSQLARDAPLMEEVLLVARGQRQIIHQLDSLSTLLHEYCGERSRHGRTDQTNRMHEVETIAIPLVLTLAIGAVGVFLFRGFTSQK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03152 660 PRINTS Uridine kinase signature 67 84 - -
Adu01g03152 660 PRINTS Uridine kinase signature 134 149 - -
Adu01g03152 660 PRINTS Uridine kinase signature 190 200 - -
Adu01g03152 660 PRINTS Uridine kinase signature 226 239 - -
Adu01g03152 660 Gene3D - 68 250 IPR027417 -
Adu01g03152 660 SUPERFAMILY CYTH-like phosphatases 263 409 IPR033469 -
Adu01g03152 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 238 IPR027417 -
Adu01g03152 660 CDD UMPK_like 69 241 - -
Adu01g03152 660 Pfam CYTH domain 272 406 IPR023577 -
Adu01g03152 660 ProSiteProfiles CYTH domain profile. 250 412 IPR023577 -
Adu01g03152 660 PANTHER URIDINE KINASE 7 648 - -
Adu01g03152 660 Pfam Phosphoribulokinase / Uridine kinase family 70 238 IPR006083 GO:0005524|GO:0016301
Adu01g03152 660 Gene3D - 256 415 - -
Adu01g03152 660 Coils Coil 502 529 - -
Adu01g03152 660 PANTHER URIDINE-CYTIDINE KINASE C-LIKE ISOFORM X1 7 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03152 Adu-Chr1 103250317 103256931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03152 68 238 PRT Gene Family AT5G40870 26.111 1.56e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03152 K00876 - gmx:100803122 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03152 01 103250317 103256931 Adu01g03152 01 103250317 103256931 ECH