Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03129 ATGGAGCCTATGGACATCGTCGGCAAATCGAAGGAAGACGCTTCGCTTCCTAAAGCAACAATGACAAAAATTATTAAAGAGATGTTACCTCCAGATGTACGTGTTGCAAGAGACGCACAAGATCTATTGATCGAGTGTTGTGTAGAATTTATAAACCTTGTTTCGTCGGAGTCCAATGAAGTCTGTAGCAGAGAGGAAAAACGGACTATTGCACCTGAGCATGTACTGAAGGCTTTAGAGGTCCTCGGCTTTGGCGAGTACATTGAAGAAGTCTATGCAGCATATGAACAGCACAAGCTGGAGACCATGCAGGACTCTTTAAAAGGTGGTGGTAAGTGGAGCAATGGAGCTGAGATGACCGAAGAAGAAGCATTAGCAGAGCAGCAACGGATGTTTGCAGAGGCGCGAGCCAGGATGAATGGCGGGGCTATTGCTTCCAAGCAACCAGAAGCTGACCAAAATATGAGACATCATTCAACCTCTCCTTTCTTCTCGCAGAAGGATTTAGAAGAAGTGGGGCCATGGCAAGGTACAAATAGGGTGTCAGTTCGTAGATACGTGTAA 564 0.4592 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSREEKRTIAPEHVLKALEVLGFGEYIEEVYAAYEQHKLETMQDSLKGGGKWSNGAEMTEEEALAEQQRMFAEARARMNGGAIASKQPEADQNMRHHSTSPFFSQKDLEEVGPWQGTNRVSVRRYV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03129 187 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Adu01g03129 187 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Adu01g03129 187 PANTHER PROTEIN DR1 HOMOLOG 1 155 - -
Adu01g03129 187 SUPERFAMILY Histone-fold 12 144 IPR009072 GO:0046982
Adu01g03129 187 Gene3D Histone, subunit A 4 144 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03129 Adu-Chr1 102918142 102921603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03129 1 153 CCAAT-DR1 Transcription Factor Family AT5G23090 83.226 3.61e-91 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Adu01g03129 CBFD_NFYB_HMF 8e-22 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03129 K21751 - gmx:100807912 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03129 01 102918142 102921603 Adu01g03129 01 102918142 102921603 ECH