Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu01g03110 ATGACGTGGCGGAGGCTGTTAGAGCCTGTGGCTGCACACGCCTCCCTTCTCTGCTTCACTTCTTTGCTTCTTCTAAAGCTTCACCACCGCCTCTCCTTATCGTGGTGGATAATATTCTTTCCTCTTTGGATCTTTCATGCCATTGTGGCTCGAGGGAGGTTTTCATTGCCAGGGTTGTCAGCCCGACATAATCAAAATTGGGCAACAGGTCATGCTGTCGTTGCAATGCCATTACTTACTGCATTTGAACTGCTCCTTTGTATATATCTTGAGAGCATATGTGTTCGTGGTGCTCAAGTAGTCAATATGAAGATTGTGTTCCTTCCATTACTAATATTTGAAATCATTATTGTCATGGAAAATTTCAGATTATGTAGGGCTCTAATGCCAGGGGATGAAGAAAACATGAATGCTGAGCACTTTTCGGTTGCAATCTCTAGGGTCTTCTTCATTACTGCTACAATTTTCACACTCTTAAAACTGAGTGGTGATTTACTCGTTCTCAGCTGGTGGGATTTATTTGTTAACCTTGCCATCGTCGAGTGCTTTGCTTTTCTTGTATGTACAAAGTGGTCCAATCTGGTCAGTGGTTTAGTGGTTTCTTCAGAGGGAAATCGACGCCTAAAGAGAATGTGTAACATGCAAGACATAATCATGGAAGTACCAGTTATAGTATTCCAGATTCTAATTTGTAGGTATTTAGAGGGGGCACCTGCTTGTGCTGAAAAGAAACCTGCACCGAGTTTCTTTTCTTTTCTTTTCCAGCTGCAAAGTGCTGGTGTAATGTTTGCAGCATCTGCCTTAGTGGAGAAACTTATACTGCTATTAAATAGTGGAGCTGCTCCAAGAATATATTCTAGAGGTGTTTCAAGAGTTCATGATTGTTACTTGGGCCTCTTGCACCATGGTTCTAGATTTTTAGGTTGGTTTTCAATTGCTGAAAGGAGCCAGGAAGAACAGGAAAATTTGGACTGTGAAGGATCTTCTGGTTATAATACGTTCTCTGGCAACCCACCTGTACCTGAGATCATTAAGAAAATGCCTAAAAAGGATCTTGCTGAGGAGGTTTGGAGACTGCAGACAGCTCTTGGTGAGCAGGCAGAAATTACAAAATGCCGCGAGCGGGAGTATGAAAGGCTTAAAAATGAGAAAATATTATGCAGAATTTGTTTTCAGAGAGAGATTAGCATTGTACTACTTCCATGCAGGCATCGCAGTCTTTGCAGCACATGCGCGGCGAAATGCAAGAACTGCCCAATCTGCCGCGACAATATTATAATGCGATTACCCGTATATGATGCTTAG 1305 0.423 MTWRRLLEPVAAHASLLCFTSLLLLKLHHRLSLSWWIIFFPLWIFHAIVARGRFSLPGLSARHNQNWATGHAVVAMPLLTAFELLLCIYLESICVRGAQVVNMKIVFLPLLIFEIIIVMENFRLCRALMPGDEENMNAEHFSVAISRVFFITATIFTLLKLSGDLLVLSWWDLFVNLAIVECFAFLVCTKWSNLVSGLVVSSEGNRRLKRMCNMQDIIMEVPVIVFQILICRYLEGAPACAEKKPAPSFFSFLFQLQSAGVMFAASALVEKLILLLNSGAAPRIYSRGVSRVHDCYLGLLHHGSRFLGWFSIAERSQEEQENLDCEGSSGYNTFSGNPPVPEIIKKMPKKDLAEEVWRLQTALGEQAEITKCREREYERLKNEKILCRICFQREISIVLLPCRHRSLCSTCAAKCKNCPICRDNIIMRLPVYDA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu01g03110 434 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 363 432 IPR013083 -
Adu01g03110 434 SUPERFAMILY RING/U-box 379 428 - -
Adu01g03110 434 SMART ring_2 387 421 IPR001841 -
Adu01g03110 434 Pfam Zinc finger, C3HC4 type (RING finger) 385 425 - -
Adu01g03110 434 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 433 - -
Adu01g03110 434 ProSiteProfiles Zinc finger RING-type profile. 387 422 IPR001841 -
Adu01g03110 434 Pfam Transmembrane Fragile-X-F protein 25 254 IPR019396 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu01g03110 Adu-Chr1 102620111 102626596 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu01g03110 3 433 C3H Transcription Factor Family AT1G73950 58.691 9.52e-180 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu01g03110 - - ahf:112738273 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu01g03110 01 102620111 102626596 Adu01g03110 01 102620111 102626596 ECH